Mycobacterium paraterrae: MKK62_06745
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Entry
MKK62_06745 CDS
T08203
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mpaa
Mycobacterium paraterrae
Pathway
mpaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MKK62_06745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpaa03019
]
MKK62_06745
03009 Ribosome biogenesis [BR:
mpaa03009
]
MKK62_06745
Enzymes [BR:
mpaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MKK62_06745
Messenger RNA biogenesis [BR:
mpaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MKK62_06745
Ribosome biogenesis [BR:
mpaa03009
]
Prokaryotic type
rRNA helicases
MKK62_06745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
HEM4
Transketolase_C
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UMB70973
LinkDB
All DBs
Position
complement(328665..330365)
Genome browser
AA seq
566 aa
AA seq
DB search
MSAPHDDTVTFADLHIHPSVLQALADVGYESPSAIQAATIPALMEGSDVVGLAQTGTGKT
AAFAVPILSKIDTDSKATQALVLAPTRELALQVAEAFSRYGTHLPQINVLPIYGGSSYGV
QLAGLKRGAQVVVGTPGRVIDHLERGTLDLSRVDYLVLDEADEMLTMGFAEEVERILAET
PEYKQVALFSATMPPAIRKLSNKYLHDPIEVKVEAKTATAENITQRYIQVAGPRKMDALT
RVLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSASAINGDIPQAVRERTIAALKDGGID
ILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGNALLFVSPRERHLL
KSIEKATRQKLTEAQLPSVDDVNAQRVAKFADSITDSLAAPGLELFRRLVADYERDHDIP
MADIAAALALQSRNGEDFLMAPEPPPERRTRDHQDRPAKSGRAAGEGPKKGFATYRISVG
KRHKVGPGAIVGAIANEGGLHRSDFGHITIKPEFSLVELPAKLPRETLKALEKTRISGQL
INLQPDRAPDKNRRGGRGAPRREHRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccccgcatgacgacaccgtgaccttcgccgacctgcacattcacccctcggtg
ctgcaggcgctggctgacgtcggctacgagtcgccgtcggcgatccaggccgcgacgatt
ccggccctgatggagggctctgatgtggtcggtttggcccaaaccggcacgggcaagacg
gcagcgttcgcggtgccgatcctgtcgaagatcgacaccgacagcaaagccacccaggcg
ttggtgctggcaccgacgcgcgagttggctctgcaggtcgccgaggcgttcagccggtac
ggcacgcaccttccgcagatcaacgtcctgccgatctatggcggctcctcctacggggtg
cagttggccgggctcaagcgcggcgcgcaggtcgtggtcggcacccccggccgagtgatc
gatcacctggagcgcgggacactggatctgtcgcgcgtcgactatctggtgctcgacgag
gccgacgagatgctgacgatgggattcgccgaggaagtcgagcggatccttgccgagacc
ccggaatacaagcaggtcgcgctgttctccgcgacgatgcccccggcgatccgcaagctc
agcaacaagtatctgcacgacccgattgaggtcaaggtcgaggcgaagaccgcgaccgcc
gagaacatcacgcagcgctacatccaggtagccggtccgcgcaagatggacgcgctgacc
cgggtgctcgaggtcgagccgttcgaggcgatgatcgtcttcgtccgcaccaagcaggcc
accgaagaggtcgccgagaagctacgtgcgcgtggcttttccgcgtcggccatcaacggc
gacatcccgcaggcagtgcgcgagcggaccatcgcggcgttgaaagacggcggcatcgac
atcctggtggccaccgacgtcgctgcccgcggtctggatgtcgagcgaatttcgcacgtg
ctgaactacgacattccgcacgacaccgagtcgtatgtgcaccggatcggccggaccggc
cgggcgggacggtcgggcaacgcgctgctgttcgtgtcgccgcgagaacgccacctgctc
aagtcgatcgagaaggccacccggcaaaagttgaccgaggctcaactgcccagcgtcgat
gacgtcaacgcgcagcgggtggcgaagttcgccgactcgatcaccgacagcctcgccgcg
cccggactcgaattgttccgccggctggtcgcggattacgaacgcgatcacgacattccg
atggccgacatcgccgcggcgctggcattgcagtcccgcaacggcgaagacttcctgatg
gcgcccgagcctccgcccgaacgtcggacccgcgaccaccaggaccggcctgccaagtct
ggccgcgccgcgggggagggccccaagaaggggttcgccacctaccgcatctcggtcggc
aagcggcacaaggtcgggccgggcgcaatcgtcggcgccatcgccaacgaaggtgggttg
caccgcagcgatttcggccacatcacgatcaagccggaattctcgctggtggaattgccg
gccaagctgccccgggagacgctgaaagcgcttgagaagacccgcatctccggtcaactg
atcaacctgcaaccggatcgggcgccggataagaaccggcgcggcggtcgtggcgcgccg
cgtcgggaacacaggggatga
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