Mycobacterium paraterrae: MKK62_12015
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Entry
MKK62_12015 CDS
T08203
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mpaa
Mycobacterium paraterrae
Brite
KEGG Orthology (KO) [BR:
mpaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpaa03032
]
MKK62_12015
03400 DNA repair and recombination proteins [BR:
mpaa03400
]
MKK62_12015
Enzymes [BR:
mpaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MKK62_12015
DNA replication proteins [BR:
mpaa03032
]
Prokaryotic type
DNA Topoisomerases
MKK62_12015
DNA repair and recombination proteins [BR:
mpaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MKK62_12015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UMB71875
LinkDB
All DBs
Position
4695230..4696249
Genome browser
AA seq
339 aa
AA seq
DB search
MKLRKSNVGGAGLHRVRRGRGFSYVDDDRVGVADAEVLARIEGLVIPPAWKNVWISPHVN
GHIQAVGTDAAGRRQYIYHERWQEERSEEKYERTLRLAKHLPDWRLALLVDLKRRGVARD
RVLALAQHLIDQGYFRAGGEEYVDENGSYGLSTLLREHVHLKRGRVEFDYPAKSGVRRTI
SLEDPLVLRAVGSLLRAPATTPRLLAYQTSDGWSEVHADDINARFRELVGDEFSVKDLRT
WHGTVLAAEAFAIAGDPTSKTARRREEAAVMRAVADQLGNTPAVARRSYVDPRVVTAYER
GLTIASALRQAERKRSPEVRREVIERATARMINRVARAK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgcgcaagagcaacgtcggcggagcggggctgcatcgggtgcgccgcggccgc
gggttctcctacgttgacgacgatcgcgtcggtgttgccgacgccgaggtgctcgcgcgg
atcgagggcctggtgattcctccggcgtggaagaacgtgtggatatcgccccatgtcaac
ggccacatccaggctgtcggcaccgacgcggccggacgtcggcaatacatctatcacgaa
cgctggcaagaggagagatccgaggagaagtacgagcgcacgttgaggctcgccaagcac
ctgcccgattggcgcctcgcgctgctggtcgatctgaagcgtcgcggcgtggcacgcgac
cgcgtccttgcgctcgcccagcacctgatcgaccagggatacttccgcgccggcggcgag
gagtacgtcgacgagaacggtagttacggcctgtcgaccttgctacgcgagcacgtgcac
ctgaagcgcggcagggtcgaattcgactatcccgcgaaaagcggtgtgcgtaggactatt
tcgctggaggacccactggtgctccgagcggtgggttcgctgttgcgcgccccagccacc
acgccgcgtctgcttgcgtaccagacgtcagacggttggtcggaagtccacgccgacgac
atcaacgcgagatttcgcgaactggtgggtgatgagttcagtgtcaaggacttacgaacc
tggcacggtacggtgctcgccgccgaggctttcgccatcgccggcgacccgacatctaaa
acggcccgccgccgcgaggaggcggcagtcatgcgggcagtggccgaccagctggggaac
actcccgcagtggcgcgcaggtcatacgtcgatccgcgcgtggtcaccgcctacgagcgc
gggctgaccatcgcgagtgcgttgcgtcaggccgagcgtaagcgcagcccggaggtacgg
cgagaagtgatcgagcgcgccaccgcgcgaatgatcaatcgtgtcgctcgcgctaaatag
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