KEGG   Mycobacterium paraterrae: MKK62_15440
Entry
MKK62_15440       CDS       T08203                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mpaa  Mycobacterium paraterrae
Pathway
mpaa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MKK62_15440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpaa03019]
    MKK62_15440
Messenger RNA biogenesis [BR:mpaa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MKK62_15440
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: UMB67875
UniProt: A0ABY3VEK6
LinkDB
Position
3972347..3974023
AA seq 558 aa
MEPDLQPPGPLTTGGLRVTALGGISEIGRNMTVFEHLGRLLIIDCGVMFPTHDEPGVDLI
LPDFRHIEDRLDDVEALVLTHAHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAAKCREHR
VKPVFVEVSEGMRTTHGVFECEYFAVNHSIPDALAIAVRSGAGTVLHTGDIKLDQLPLDG
RPTDLPGMSRLGDAGVDLFLCDSTNAEIPGVGPSESEVGPSLHRLIRGAQGRVIVACFAS
NVDRVQQIIDASVALGRRVSFVGRSMVRNMGIARDLGFLEVDDSDLVDIGAAELMAPEQV
VLITTGTQGEPMAALSRMSRGEHRSITLTAGDLIILSSSLIPGNEEAVYGVIDELAKIGA
RVVTNQQARVHVSGHAYSGELLFLYNGIRPRNVMPVHGTWRMLRANAKLAASTGVPDESI
VLAENGVSVDLVGGAVRIAGAVPVGKMFVDGLITGDVGDTTLGERLILSSGFVAVTVVIR
RETGRPAASPHLHSRGFSEDPKALEPAVRLVEAELESLVAQHVTDPARIAQAVRRTVGKW
VGETYRRQPMIVPTVIEI
NT seq 1677 nt   +upstreamnt  +downstreamnt
gtggaaccagaccttcagccgccgggtccgttgaccacgggtggtctgcgggtgaccgcg
ctcggcggaatcagcgaaatcggccgcaacatgaccgttttcgagcatttgggccggctg
ctgatcatcgactgcggggtgatgtttccgacccacgacgagcccggcgtcgacctcatc
ctgcccgacttccgacacatcgaagaccggctcgacgacgtcgaggccttggtgctcacc
cacgcgcacgaagaccacatcggcgccatcccattcctgctcaagctccgccccgacatt
ccagtcgtcggatcgaagttcaccctggcgctcgtggccgcgaagtgccgtgagcaccgg
gtcaagccggtgttcgtcgaagtgtccgagggcatgcgcaccacccacggtgttttcgag
tgcgaatacttcgctgtcaaccactcgatccccgacgcgctggccatcgcggtgcgttcg
ggtgcgggcaccgtcctgcacaccggtgatatcaagctcgatcagctgccgttggacggc
cgtcccactgatttgccgggcatgtcgaggctcggtgacgctggggtcgacctgttcctg
tgcgattcgaccaacgctgagatccccggtgtcgggccgtcggagagcgaggtcgggccg
tcgctgcatcggctgattcgcggggcgcagggacgggtgatcgtcgcgtgtttcgcctcg
aatgtcgatcgcgtgcaacagatcatcgatgcgtcggtggcgctgggtcggcgggtctca
ttcgtcggacgttccatggtgcgcaacatgggcatcgctcgtgacctcggctttctggag
gtggacgactccgatctggtcgacatcggcgccgccgagctgatggcgcctgagcaggtc
gtgctcatcaccaccggcacacagggcgagccgatggcggcgctgtcgcggatgtcgcgc
ggcgagcatcgcagcatcacgctgaccgccggcgacctgatcatcttgtcgtcctcgttg
atccccggcaacgaagaagcggtctacggtgtcatcgacgaactggccaagatcggcgcc
cgcgtcgtcaccaatcagcaagcccgcgtgcatgtctcaggccatgcctactcgggtgag
ttgctgttcctctacaacgggatccgtccccgcaacgtcatgccagtccacggcacctgg
cgcatgctacgggcaaatgccaaactcgccgccagcaccggggttcccgacgagtcgatt
gtgttggccgagaacggggtcagcgttgacctggtgggcggagcggtccgcatcgccggt
gccgtgccggtcggcaagatgttcgtcgacggcttgatcaccggcgatgtcggcgacacc
accttgggcgaacgactcatcctgtcctccggcttcgtcgcggtcacggtggtgattcgt
cgggagacagggcgaccggcggcgtcgccgcacctgcactcccgcggcttttccgaggac
cccaaggcacttgagcccgctgtccgcctggtcgaggcggagttggaatcgcttgtagcc
caacacgtcacagatccggcgcggatcgctcaggccgttcgtcgcacggtcggcaaatgg
gtgggggagacttaccgccgacagccgatgatcgtgccgaccgtcatcgaaatctga

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