Mycobacterium paraterrae: MKK62_15440
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Entry
MKK62_15440 CDS
T08203
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mpaa
Mycobacterium paraterrae
Pathway
mpaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MKK62_15440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpaa03019
]
MKK62_15440
Messenger RNA biogenesis [BR:
mpaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MKK62_15440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UMB67875
UniProt:
A0ABY3VEK6
LinkDB
All DBs
Position
3972347..3974023
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AA seq
558 aa
AA seq
DB search
MEPDLQPPGPLTTGGLRVTALGGISEIGRNMTVFEHLGRLLIIDCGVMFPTHDEPGVDLI
LPDFRHIEDRLDDVEALVLTHAHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAAKCREHR
VKPVFVEVSEGMRTTHGVFECEYFAVNHSIPDALAIAVRSGAGTVLHTGDIKLDQLPLDG
RPTDLPGMSRLGDAGVDLFLCDSTNAEIPGVGPSESEVGPSLHRLIRGAQGRVIVACFAS
NVDRVQQIIDASVALGRRVSFVGRSMVRNMGIARDLGFLEVDDSDLVDIGAAELMAPEQV
VLITTGTQGEPMAALSRMSRGEHRSITLTAGDLIILSSSLIPGNEEAVYGVIDELAKIGA
RVVTNQQARVHVSGHAYSGELLFLYNGIRPRNVMPVHGTWRMLRANAKLAASTGVPDESI
VLAENGVSVDLVGGAVRIAGAVPVGKMFVDGLITGDVGDTTLGERLILSSGFVAVTVVIR
RETGRPAASPHLHSRGFSEDPKALEPAVRLVEAELESLVAQHVTDPARIAQAVRRTVGKW
VGETYRRQPMIVPTVIEI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtggaaccagaccttcagccgccgggtccgttgaccacgggtggtctgcgggtgaccgcg
ctcggcggaatcagcgaaatcggccgcaacatgaccgttttcgagcatttgggccggctg
ctgatcatcgactgcggggtgatgtttccgacccacgacgagcccggcgtcgacctcatc
ctgcccgacttccgacacatcgaagaccggctcgacgacgtcgaggccttggtgctcacc
cacgcgcacgaagaccacatcggcgccatcccattcctgctcaagctccgccccgacatt
ccagtcgtcggatcgaagttcaccctggcgctcgtggccgcgaagtgccgtgagcaccgg
gtcaagccggtgttcgtcgaagtgtccgagggcatgcgcaccacccacggtgttttcgag
tgcgaatacttcgctgtcaaccactcgatccccgacgcgctggccatcgcggtgcgttcg
ggtgcgggcaccgtcctgcacaccggtgatatcaagctcgatcagctgccgttggacggc
cgtcccactgatttgccgggcatgtcgaggctcggtgacgctggggtcgacctgttcctg
tgcgattcgaccaacgctgagatccccggtgtcgggccgtcggagagcgaggtcgggccg
tcgctgcatcggctgattcgcggggcgcagggacgggtgatcgtcgcgtgtttcgcctcg
aatgtcgatcgcgtgcaacagatcatcgatgcgtcggtggcgctgggtcggcgggtctca
ttcgtcggacgttccatggtgcgcaacatgggcatcgctcgtgacctcggctttctggag
gtggacgactccgatctggtcgacatcggcgccgccgagctgatggcgcctgagcaggtc
gtgctcatcaccaccggcacacagggcgagccgatggcggcgctgtcgcggatgtcgcgc
ggcgagcatcgcagcatcacgctgaccgccggcgacctgatcatcttgtcgtcctcgttg
atccccggcaacgaagaagcggtctacggtgtcatcgacgaactggccaagatcggcgcc
cgcgtcgtcaccaatcagcaagcccgcgtgcatgtctcaggccatgcctactcgggtgag
ttgctgttcctctacaacgggatccgtccccgcaacgtcatgccagtccacggcacctgg
cgcatgctacgggcaaatgccaaactcgccgccagcaccggggttcccgacgagtcgatt
gtgttggccgagaacggggtcagcgttgacctggtgggcggagcggtccgcatcgccggt
gccgtgccggtcggcaagatgttcgtcgacggcttgatcaccggcgatgtcggcgacacc
accttgggcgaacgactcatcctgtcctccggcttcgtcgcggtcacggtggtgattcgt
cgggagacagggcgaccggcggcgtcgccgcacctgcactcccgcggcttttccgaggac
cccaaggcacttgagcccgctgtccgcctggtcgaggcggagttggaatcgcttgtagcc
caacacgtcacagatccggcgcggatcgctcaggccgttcgtcgcacggtcggcaaatgg
gtgggggagacttaccgccgacagccgatgatcgtgccgaccgtcatcgaaatctga
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