KEGG   Mycobacterium paraterrae: MKK62_18275
Entry
MKK62_18275       CDS       T08203                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
mpaa  Mycobacterium paraterrae
Pathway
mpaa03420  Nucleotide excision repair
mpaa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mpaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MKK62_18275
   03430 Mismatch repair
    MKK62_18275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpaa03400]
    MKK62_18275
Enzymes [BR:mpaa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MKK62_18275
DNA repair and recombination proteins [BR:mpaa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MKK62_18275
   MMR (mismatch excision repair)
    Other MMR factors
     MKK62_18275
SSDB
Motif
Pfam: UvrD-helicase UvrD_C PDDEXK_1 AAA_19 UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: UMB68366
LinkDB
Position
3396212..3399556
AA seq 1114 aa
MTVLAPARYSPAELASALGLFEPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLV
ANGYADPGQVLGLTFTRKAAGQLLRRVRSRLARLSGTGLVVCGQPDEPIGVPVVSTYHAF
AGQLLREYGLLSTPGSAQPVEPDTRLLSETELWQLAFDVVNSYPGELNTEKNPAAVTAMV
LRLSGQLAEHLVDTDQVRDTHVELERLVHTLPAGPYQRDRGPSQWLLRMLATQSERAEFV
PLIDALHRRMRAEKVMDFGSQMACAARLAMTVPQVGEQLRGRYRVVLLDEYQDTGYAQRM
LLSSLFGGGVDEQLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLPDGSPAPVLELSTS
WRNPPTTLHVANAMSADARQRSVAVNALRARPGADLGTVRCALLPDVLAEREWLADHLQQ
RYRQAAIDGVAPPTAAVLVRRNTDAAPIAAALRARGIPVEVVGLAGLLAVPEVADVMAML
RLVVDPTAGAAAMRVLTGPRWRLGARDIATLWRRSVAIASAAEPGAAGRDHGSVELDDGR
TAHSGETAERIAQAADPQADTAGLADALADPGPAQMYSAEGYRRIGELADELNTLRGHLG
HPLPDLVAEVRRLLGVDCEVRAASRGSGWAGTEQLDAFADVVHGFADRTAAGGDSLASVV
ELLAYLDAAAIVENGLAPAQVVVAQNRVQVMTVHAAKGLEWQVVAVPHLSGGLFPSTAQS
RTWLTDAADLPPLLRGDRSVKGVHGVPVLDTSDVTDRKQLSDRISKHRAQLEQRRIDEER
RLLYVAITRSEDTLLLSGHHWAATGIKPRGPSDFLCELKDIIDRSADAGRPCGVVEYWAP
APPDGERNPLRDGVQEASWPVDPLAARRVDVQRGAELVRAAMSSDAAVSAADYEGWAADV
DALLKERAQAAQPATRTLPNGLSVSSLVDLARDPDHAAQRLTRRLPARPEPHALLGNAFH
DWVERFYGAERLFDLADLPGAADTEIAQRDAEELAALQEAFLISPWAARTPIAVEVPFEM
AIGGKVIRGRIDAVFAEPDGGATVVDWKTGERPQGSDAARHAAIQLGVYRIAWAALSGCD
ESLVRTAFHYVRTGCTVVPDTLPGPDEMAGLLAR
NT seq 3345 nt   +upstreamnt  +downstreamnt
atgaccgtcctcgcgccggcacgctacagcccggccgaattagccagtgcactcggcctt
ttcgagccgaccgaggaacaggccgcggtcatcgccgctccgccgggaccgctggtggtc
atcgccggcgccggcgccggcaagactgagaccatggccgcgcgggtcgtgtggctcgtc
gccaacggctacgccgatcccggacaggtactcggcctgaccttcacccgcaaagcggcg
ggtcagctgttgcgccgggtcaggtcccgactggcccgtctcagcggcacggggctggtc
gtgtgcggtcaaccggacgagcccattggggtgccggtagtcagcacctatcacgctttc
gccggccagttgctccgcgaatacggcttgctgtcgacccccggctcggcacaacccgtc
gaacccgacacccgcctactcagcgagaccgaactgtggcagctggcattcgacgtcgtc
aactcctacccgggagagctcaacaccgagaagaacccggccgctgtcaccgcgatggtg
ctgcggctgtcgggtcaacttgccgagcatctcgtcgacaccgaccaggttcgcgacacc
catgtcgaactcgagcggttggtgcacacccttccggcaggcccctaccaacgcgaccgc
ggccccagccagtggctgctgcgcatgctggccacccaatccgaacgcgccgagttcgtg
ccgctgatcgacgccctgcaccggcggatgcgggccgagaaggtgatggacttcggcagc
caaatggcttgcgccgcaaggctggcgatgacggtgccacaggtcggcgaacaactgcgc
ggccgttatcgtgtggtgctgctggatgaataccaggacaccggttacgcgcaacggatg
ttgctgtcgtcgctgttcggtggtggagtcgacgaacaactggcgcttaccgcggtcggc
gacccgatccagtccatctacggctggcgcggcgcctcggccaccaacctgccgcgtttc
accaccgatttcccgctgcccgacggcagcccggccccggtgttggagttgagcacgagc
tggcgcaacccgccgacgacgttgcatgttgccaatgccatgtcggccgatgcgcggcag
cgttcggtggcggtcaacgcgctgcgtgcgcggcccggcgccgacctcggcacggtgcgc
tgcgcgctgctgcccgacgtgctggccgaacgcgagtggctcgccgaccatctgcaacag
cgttaccggcaggccgcaatcgacggggtggcgccgcctaccgccgcggtcctggtgcgc
cgcaacaccgacgctgcgccgatcgccgcagcgctgcgcgcccgcggcatccccgtggaa
gtcgtaggactggcaggtctgctcgcggtgcccgaggtcgccgacgtaatggcgatgctg
cggctggtcgtcgaccccactgccggggctgccgcgatgcgggtgctcaccggtccccgg
tggcggctcggcgcccgcgacatagcgacgctgtggaggcgttccgtcgcgatcgcaagc
gcggcggagccgggcgccgcgggtcgcgaccatgggtctgtcgagctcgacgacggccgt
acggcgcattccggcgagacggcggaacggatcgcacaagccgcggacccgcaggccgat
accgccggcctggccgacgcgctcgccgatcctggtccagcacagatgtattcggcggag
ggttatcggcgtatcggtgaactcgccgacgagctcaacacgttgcgcggccacctcggt
cacccgctgcccgacctggtcgcggaggttcgccgactgctcggtgtcgactgcgaggtg
cgagcggcgtcacggggctccggatgggccggcaccgagcagctcgacgccttcgccgac
gtggtccacggctttgccgatcggaccgccgctgggggcgactcgctggcttcggtcgtt
gagctgctggcttacctggacgcggcggcgattgtcgagaacggcttggcgccggcgcag
gtcgtggtcgcgcagaaccgggttcaagtgatgaccgtccacgcggcaaagggtttggag
tggcaggtggtcgccgtgccgcacctatcgggcgggttgttcccgtcgactgcccagtcc
cgcacctggctcaccgatgctgccgacctcccgccgctgttgcgcggtgaccggtccgtg
aagggcgtgcacggcgtgccggtgctcgacacgtcggatgtgaccgatcgaaagcaattg
tcggacaggatctctaagcaccgcgctcagctcgagcaacgccgcatcgacgaggagcgt
cgactgctctatgtggcgatcacccgctcggaggacacgctgctactgtccggccaccac
tgggccgccaccggcatcaagccgcgggggccatcggactttctgtgcgaactgaaggac
atcatcgaccgatcggcagacgcgggccgaccctgtggtgtcgtcgaatactgggcgccc
gcgccgcccgacggggaacgaaacccgttgcgcgacggtgtgcaggaggcgagctggccc
gtcgacccgctggctgctcgccgcgtcgacgtccagcgcggtgccgaactcgtcagggcc
gcgatgtcatccgacgctgccgtgtcggccgccgactatgaagggtgggccgccgacgtg
gacgccctgctgaaggagcgtgcccaggccgcgcagccggccacgcgcaccctgcccaac
gggctgtcggtcagcagcctagtcgatctggcccgcgatcccgaccatgcggcgcagcga
ctcacccgccggttaccggcacgacccgagccacatgcattgctgggcaatgccttccac
gactgggtcgagcgtttctatggtgccgagcggctgttcgatcttgccgatctgcccggc
gccgccgacaccgagatcgcgcagcgcgacgccgaagaactcgcggcgctgcaagaggcc
ttcctgatttcaccgtgggcggcgcggacaccgatcgctgtcgaggtgccattcgaaatg
gccatcggcggcaaggtgattcgtggtcgtattgacgcggtatttgccgagccggacggc
ggcgcgaccgtggtcgattggaagaccggtgagcggccgcagggctccgacgccgctcgg
cacgccgcgatccagctcggcgtctaccgcatcgcttgggctgcgctcagcggctgcgac
gaatcgttggtgcgcaccgcatttcactacgtgcgaaccgggtgcaccgtcgtcccggat
acgttgccagggcccgacgagatggccgggctgctggcccgttag

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