Methylomonas paludis: KEF85_00270
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Entry
KEF85_00270 CDS
T07508
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mpad
Methylomonas paludis
Pathway
mpad00300
Lysine biosynthesis
mpad00470
D-Amino acid metabolism
mpad01100
Metabolic pathways
mpad01110
Biosynthesis of secondary metabolites
mpad01120
Microbial metabolism in diverse environments
mpad01230
Biosynthesis of amino acids
Module
mpad_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mpad00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KEF85_00270 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KEF85_00270 (dapF)
Enzymes [BR:
mpad01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KEF85_00270 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QWF70978
UniProt:
A0A975MN81
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Position
61337..62167
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AA seq
276 aa
AA seq
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MEFYFTKMHGLGNDFVVIDAINQNIDLSSEQIRLIADRHFGVGCDQLLLVEQPVHANADF
KYRIFNADGSEVAQCGNGARCFARFVVDKNLTDKRRIVVDTHAGQLVLNVAEDGLITVNM
GIPRHQPAQIPLNMPQEAKRYTIQLDSGSIEFAALSIGNPHAVIQVADIDSAPLATVGAV
LESHPLFPERANIGFMQIIDRHTIKLRVYERGAAETLACGSGACAAVIAGIEQNLLEHEV
DVSLPGGALKISWQGRDQAVYMTGPAGLVFEGRIIV
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggaattttatttcactaaaatgcatggcttgggtaacgacttcgtagttatcgatgcc
atcaatcagaacatagacttatcgtccgagcaaattcgcctgattgccgaccggcatttt
ggtgtgggctgcgatcagttattattggtagaacaaccggtacatgcgaatgctgatttt
aaatatcgcatttttaatgccgatggcagcgaagtggctcagtgcggaaatggtgcccgt
tgttttgcccgttttgtggtggataaaaacttgacagacaaacggcgcatcgtggttgat
acccatgccggacaactggttttgaatgtggctgaggatggtttgattactgtcaatatg
gggataccccggcatcagccggcgcaaatcccgctgaatatgccgcaagaagccaaacgc
tataccatacagctggacagcggcagcatagagtttgccgcactgtctatcggtaatcca
catgctgtgattcaggtggctgatattgactcggcgcctttggcaacagtcggcgcggta
ctggagagtcatccgctgtttccggaacgggccaatatcggctttatgcaaatcatagac
cgccataccatcaaattgcgtgtttatgagcgcggtgcggcagaaactctcgcctgcggt
agtggtgcctgcgccgctgtcattgccggtatagagcagaatttactggagcacgaagtg
gatgttagtttaccgggcggcgcattgaaaataagttggcagggacgtgatcaagccgtc
tatatgaccgggccggctggcttggtatttgaggggcgaataatagtatga
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