KEGG   Methylomonas paludis: KEF85_00995
Entry
KEF85_00995       CDS       T07508                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mpad  Methylomonas paludis
Pathway
mpad03030  DNA replication
mpad03410  Base excision repair
mpad03420  Nucleotide excision repair
mpad03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mpad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KEF85_00995 (polA)
   03410 Base excision repair
    KEF85_00995 (polA)
   03420 Nucleotide excision repair
    KEF85_00995 (polA)
   03440 Homologous recombination
    KEF85_00995 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpad03032]
    KEF85_00995 (polA)
   03400 DNA repair and recombination proteins [BR:mpad03400]
    KEF85_00995 (polA)
Enzymes [BR:mpad01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KEF85_00995 (polA)
DNA replication proteins [BR:mpad03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     KEF85_00995 (polA)
DNA repair and recombination proteins [BR:mpad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     KEF85_00995 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KEF85_00995 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_2
Other DBs
NCBI-ProteinID: QWF71104
UniProt: A0A975RAB6
LinkDB
Position
complement(206252..208966)
AA seq 904 aa
MSDSAAPKLILVDGSSFLFRAFHAVPPLTNARGEPTNAIYGVSNMLRKLISDYNTPYFTV
VFDAPGKTFRHDLYDEYKSHRPPMPDELRVQIQPLHDLIRTLGLPLIIENGVEADDVLGS
LAQNAARQGLEVIISTGDKDMAQLVTEQITLENTMTNSVLDIQGVIDKFGVKPEQIIDYL
ALMGDAVDNIPGVPKVGPKTAAKWLQEYGDLDNLMAHADQIKGKIGENLRSSLAQLPLSR
TLTTIKCDVALHYSLADLKRREPDIAGLREQLGNLGFSSWLKTLNETGSAQPQTPAPAPA
VPVKDYQLILEQTEFDSWLNRLEQAELFAFDTETTSLNYSEAEIVGVSFAVTAGQAAYVP
LAHEYTDAPVQLERQAILNRLKPLLEDEAKAKLGQNLKYDAHVLSNHGITLRGVRHDTML
ESYVLNSTASKHNMDDLAKHYLGVDTIHYEDIAGKGAKQIGFQEVAVEQAAEYAAEDADI
TLRLHLTLSEQLQQHPRLWALYNDIEIPLLGVITRIEANGVMIDSAMLAQQSLELAQRMI
SVEQQAHDLAGSVFNLGSPKQIQEILYDRLNLPVLKKTPKGQPSTDESVLQELALDYPLP
KLILDFRSLSKLKSTYTDKLPQQVNAKTGRVHTSYHQAVAATGRLSSSDPNLQNIPIRSE
EGRKIRQAFIAPPGYAMVAADYSQIELRIMAHLSGDAGLLAAFSQGVDVHSATAAEVFGV
ALDQVTHDLRRSAKAINFGLIYGMSAFGLAQQLGMSRNQAQSYIDLYFSRYPGVKQYMDN
IRELARQQGYVETLFGRRLYLPDINARNPAQRQYAERTAINAPMQGSAADIIKRAMLACD
QWIYHSGADLKMIMQVHDELVFEVADAQLEDCIANIRRIMSAAAELDVPLVVDVGSGLNW
DEAH
NT seq 2715 nt   +upstreamnt  +downstreamnt
atgtccgattctgctgccccaaaactgatactcgttgatggctcgtcgtttttgtttcgc
gcttttcatgccgtgccgccgttgactaatgcccgtggcgaaccgactaacgccatttac
ggggtatccaatatgttgcgtaaattgatcagtgattacaatacgccttattttacggtg
gtgtttgatgcgccgggcaagacttttcggcatgatttatatgatgaatataaatctcac
cggccaccaatgccggatgagttaagagtgcagattcagccgctgcatgatttgatccgt
actctgggtttgcctttaattattgaaaacggtgtggaagcggatgatgtgttgggcagt
ctggcccagaatgcagcccggcagggcttggaggtgattatttccaccggcgacaaggat
atggcgcaattggtgacggagcagatcactctggaaaacacgatgaccaatagtgtgctg
gacattcaaggcgtgatagacaaatttggggtgaaaccggaacagattattgattatctg
gccttgatgggcgatgcggttgacaacattcccggcgtgccgaaagttgggccgaaaacc
gccgctaaatggttgcaggaatacggtgatttggacaatctgatggcacatgctgatcag
attaagggcaagataggcgagaatttgcgcagcagtctggcgcaattacccttatcccgt
actttgaccacgattaaatgtgatgtagctttgcattattccttggcggatttgaaacgc
cgcgagccggatattgccggcttgcgcgagcaattgggtaatctgggctttagcagttgg
ctgaaaaccctgaacgaaaccggcagcgctcagccgcaaaccccagcaccggctccggct
gtgccagttaaagattatcaattgattctggaacagactgagtttgatagctggttgaac
agacttgagcaggccgagttgtttgcctttgatactgaaaccaccagcctgaattatagc
gaggccgaaattgttggcgtgtcatttgcggtgacagccggacaggcggcttatgtgccg
ctggcgcatgaatataccgatgctccggttcaacttgagcgtcaggctattttaaaccgc
ttaaagccgctgctggaggacgaagccaaggccaaacttggtcagaacctaaaatacgat
gcccatgtgctgagcaatcatggcattactttgcgcggtgttcgtcacgacactatgctg
gaatcttatgtgttgaacagcacggccagtaaacataatatggatgatctggccaagcat
tatttgggcgtggacaccatacattatgaggatattgccggcaagggcgccaagcaaatc
ggttttcaggaagtagctgtcgaacaggccgctgaatatgccgccgaagacgccgatatt
accctgcgtttgcatctaaccctgtctgaacaactgcaacaacacccgcgcttgtgggct
ttatataatgatatagaaattcccttgcttggcgtgataacccgtattgaagccaacggg
gtgatgatagacagcgccatgttggcccagcaaagtctggaactggctcagcgcatgatc
agcgtggaacagcaggcgcatgatttggctggatcggtattcaatctgggctcgccgaag
cagatacaggaaattttgtatgaccgtctgaatttgccggttttgaagaaaacccccaaa
ggccaaccgtctaccgatgaatctgtactgcaggagctggcgttagactaccctttgcct
aaactgattctggattttcgcagcctgagtaagttgaaatcgacttatacggataaattg
ccgcaacaggtcaatgccaaaaccggtcgggtgcatacttcttatcatcaagcggtggcg
gctaccggacgtttatcttccagtgaccccaatctgcaaaacattccgattcgtagtgaa
gaaggccgaaaaattcgtcaggcttttattgcaccgcccggctatgccatggtggcggcc
gattattcgcagattgagttgcgtatcatggcgcatttgtccggtgatgccggcctgctg
gcggctttttcgcaaggggtggatgtgcatagcgccactgcagcggaggtattcggtgtg
gcattggatcaggtgactcatgatttacgccgttccgccaaagccattaattttggtctg
atttacggtatgtcggcatttggcctggctcagcagttgggcatgtcgcgcaatcaagct
caatcgtatattgatttgtatttcagtcgttatccaggggtgaagcaatatatggataat
atccgcgaactggcccggcagcaaggttatgtggaaacgctgtttggccgccgcctgtat
ttgcctgatatcaatgcccgcaatccggcccaacgccaatatgccgaacgtaccgccatt
aacgcccctatgcagggcagtgccgccgatattatcaaacgcgccatgctggcttgcgat
cagtggatataccacagtggggcggatttaaaaatgattatgcaggtgcatgacgaactg
gtgtttgaagtggcggacgctcaattagaggactgcattgccaatattcgccggattatg
agtgcggcggctgagctggatgtaccgctggtggtggacgtgggaagcggcctgaactgg
gatgaggcgcattaa

DBGET integrated database retrieval system