Methylomonas paludis: KEF85_02260
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Entry
KEF85_02260 CDS
T07508
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mpad
Methylomonas paludis
Pathway
mpad02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mpad00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KEF85_02260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpad03021
]
KEF85_02260
Transcription machinery [BR:
mpad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KEF85_02260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
LMBR1
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QWF72459
UniProt:
A0A975MS18
LinkDB
All DBs
Position
complement(480213..481310)
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AA seq
365 aa
AA seq
DB search
MELARQQLQQLLLQNNLACQLMSAQLAKTGSEDGDDNINYKTLTSLCNSIVQNNDSVQGN
VPSSGEFRTASDTTIELLGSCHFYSAYLIQLTEPIISQKHPEPSSSDALYKKQVLKSRYQ
LQALREQMIVSNTGLVAFIAHKYKTTQLSFDDLMQEGMVGLIKAVDRFDPNRGICFSTYA
VFWIKQAISRLIVKQDRVVRLPIALAEKASAVFEVMRNCYLEHNRWPSQAELEKECDLSV
EEIKTVSSYFQATHSLDAAISEENDDLTLMDSLQQQQFSLPLSELIDNNLNLYIENVVAS
LPEKEATILNMRFGLKNHTEMTLQAIADQLQVTRERVRQIQNQALKKLKEQFGYDLVLFL
EPNDS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggaactggccagacaacaactgcaacaattactgctgcaaaataatctggcctgccaa
ttaatgtccgcacaattagccaaaaccggcagtgaggatggtgacgacaacatcaattac
aaaaccttgacaagcttgtgcaacagtattgtacaaaacaatgactctgtacagggtaat
gtaccaagttcaggtgagtttaggaccgcttcagacactaccattgaactgctgggcagc
tgccatttttactcagcttatctgatccaactgactgagccgattattagccaaaagcac
cccgaaccatccagtagtgacgcactttataaaaagcaggtgttaaaaagccgttatcaa
ttacaagcgttgcgcgaacaaatgattgtgtctaataccggcctggtagcatttattgcc
cataagtataaaaccacacagctgagttttgatgatctgatgcaggaaggtatggtgggg
ctgattaaggcggttgaccgcttcgaccccaatcgcggcatctgtttttccacttatgcg
gttttctggatcaagcaggctatttcccggctgatcgtgaaacaggaccgagtggtaagg
ctgccgatcgctctggccgagaaagcttctgccgtttttgaagtgatgcgcaattgttat
ctggaacacaatcgctggcccagccaagcggaactggaaaaggaatgcgatttaagcgtg
gaagaaataaaaacggtcagtagttattttcaggcgacccattctctggatgccgccatt
tccgaagaaaatgacgatttgactctaatggatagcctgcagcaacaacagttttcgcta
cctttgtctgaattgattgataacaacctgaatttatatatagagaatgtggttgccagc
ctgccggaaaaggaagcgaccattctgaatatgcgctttggcttgaaaaatcataccgaa
atgactcttcaggctattgccgatcaattacaagtgactagggagcgtgtcagacaaata
caaaaccaagccttaaaaaaactaaaagaacagtttggctacgatctggtgctttttctt
gagccgaatgacagctga
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