Methylomonas paludis: KEF85_03220
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Entry
KEF85_03220 CDS
T07508
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mpad
Methylomonas paludis
Brite
KEGG Orthology (KO) [BR:
mpad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpad03009
]
KEF85_03220 (rimO)
Enzymes [BR:
mpad01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KEF85_03220 (rimO)
Ribosome biogenesis [BR:
mpad03009
]
Prokaryotic type
ribosomal protein modification factors
KEF85_03220 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QWF71504
UniProt:
A0A975MPP3
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All DBs
Position
680384..681694
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AA seq
436 aa
AA seq
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MSNPRVGFISLGCPKALVDSEQILTRLRGEGYQIAPNYQDSDLVIVNTCGFIDAAVEESL
DSIGEALAENGRVIVTGCLGARQDEILARHPQVLKITGAHATDEVMDAVHEHLPPAHNPF
IDLLPPQGVKLTPPHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIAEVLHEAETLAASG
VKELLVVSQDTSAYGLDLRYQTGIWRGREWKSQFHDLAEALGELGIWVRMHYVYPYPHVD
AVLPLMAAGKVLPYLDIPFQHASSRILKLMKRPAAAENNLERIQAWRKICPDLTIRSTFI
VGFPGETEAEFQELLDFLTAAQLDRVGCFAYSPVRGAAANALPDPVPEAIQQERLARFME
HQAGISAARLQRRVGRIETVIIDEVAEEGAVARSQGDAPEIDGQVFIDGVTHLQVGQLVQ
VEIEEADEYDLWGRLV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatccccgcgtaggttttattagtctgggttgtcccaaggctttggttgacagc
gaacagatcttgacgcgattacgcggcgaaggctaccaaattgcccccaattatcaggac
tccgatctggtcatcgtcaacacctgcggctttattgatgccgctgtggaagaatccctg
gacagcataggcgaagccttggccgaaaatggccgggttattgtcaccggttgtctgggg
gcacgccaggatgaaattctggcccggcatccccaggtgttgaaaattaccggcgcccac
gccaccgacgaagtcatggatgcggtacacgaacatctgccgccggctcataatcctttt
atcgacttattaccgccgcaaggtgtcaaacttactccgccgcattacgcttatctgaaa
atttccgaaggctgcaatcatcgctgcaccttttgtattattccgtccatgcgcggcgat
ctggtcagccggcctattgctgaagtattgcacgaagccgaaacgctggcagccagtggc
gttaaggaactgctggtcgtttctcaggataccagtgcttacggcctggatttacgctat
caaaccggcatctggcgtggccgggagtggaaaagccaattccatgatctggcggaggct
ttgggtgaattaggcatatgggtgcggatgcattatgtttacccttatccgcatgtcgat
gcggtgctgccgttaatggccgccggcaaagtgctaccctatctggacatcccgtttcaa
catgccagcagccgcatcctgaaactgatgaaacgcccggcggctgccgaaaacaatctg
gagcgcattcaggcgtggcgcaaaatctgcccggatttgactatccgcagcacctttatc
gtcggcttccccggcgaaaccgaagccgaatttcaagaattgctggactttctcacggcg
gcgcaattggacagagtcggctgtttcgcctactccccggtacgcggtgccgccgccaat
gccttgcccgatccggtgccggaagccatccagcaagaacgtctggctcggttcatggaa
catcaggccggcatcagcgccgcccgtctgcagcgccgagtgggtcgtatcgaaaccgtg
attatcgatgaagtggccgaagagggcgcagtagcccgcagccagggcgatgccccggaa
atcgacggtcaggtgtttatcgatggcgtcacccatctacaggtgggccagttggtgcag
gtggaaattgaagaagccgatgaatatgatttgtggggaaggttggtttag
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