Methylomonas paludis: KEF85_07300
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Entry
KEF85_07300 CDS
T07508
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mpad
Methylomonas paludis
Brite
KEGG Orthology (KO) [BR:
mpad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpad03016
]
KEF85_07300 (truB)
Enzymes [BR:
mpad01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KEF85_07300 (truB)
Transfer RNA biogenesis [BR:
mpad03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KEF85_07300 (truB)
Prokaryotic type
KEF85_07300 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QWF72246
UniProt:
A0A975RBG1
LinkDB
All DBs
Position
complement(1587293..1588204)
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AA seq
303 aa
AA seq
DB search
MAKRKSGLDIHGILLLDKREGVSSNRALQEVRRLLNANKAGHTGSLDPLATGLLPLCFGE
ATKVSGMMLDQDKRYQVRVRLGVMTDTGDAEGQVIAEMPVPAFSETTLAACLDSFIGEID
QVPPMYSALKHQGQKLYELARAGISIDRPPRRISIYALNLLDYGADYLCLDVSCSKGTYI
RSLAEDIATKLGSCGTVASLRRSAAGQFDLSAAYTLEQLQAMRPEQLQNCLIDVDAPLAD
IPALQLSAAQCLCIKQGQQITMSAGLPGLVRIYCEQDFLGLGELLLNGKLAPKKLFNLDN
QLH
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgtaaatccggtctggatatccacggtattttgttgctggataaacgtgaa
ggcgtttcttccaatcgggctttgcaggaagtcagacggctgctgaatgccaataaagcc
ggtcataccggcagtttggatcctttggctaccggactgttgccgctgtgtttcggtgag
gcgaccaaggtgtcggggatgatgctggatcaggataaacgttatcaggttcgggtgcgg
ctgggggtgatgactgataccggtgatgcggaaggtcaggtgattgctgaaatgccggtt
ccggcgttttctgaaacgactctggcagcctgcctggacagctttatcggcgagattgat
caggtgccgcctatgtattcggctttgaaacatcaaggccaaaagctgtacgaactggcc
agagcggggattagtatagacagaccgccccggcgcatcagtatttatgctttaaacttg
ctggattatggcgcggattatctgtgcctggatgtgagttgctcgaaggggacgtatata
cgctcgctggcggaagatatcgccactaaattgggcagttgcggtacggtggccagttta
cggcgcagcgcagccggtcagtttgatttaagtgccgcttatactctggagcaattgcag
gctatgcgcccggagcagttgcaaaactgtttgattgatgtggatgcgcctttggcggat
attccggcgctgcaattatcggcggcgcaatgtttgtgtatcaaacaaggccagcagatt
acgatgtcggccggcttgccgggtttagtcagaatttactgtgaacaggactttttgggg
ttgggtgaattgctattaaatggtaaactagccccgaaaaaattatttaatctggataat
caattacattag
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