Methylomonas paludis: KEF85_07705
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Entry
KEF85_07705 CDS
T07508
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mpad
Methylomonas paludis
Brite
KEGG Orthology (KO) [BR:
mpad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpad03021
]
KEF85_07705 (rapA)
Transcription machinery [BR:
mpad03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KEF85_07705 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Flavi_DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
QWF72320
UniProt:
A0A975RAC0
LinkDB
All DBs
Position
1687690..1690485
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AA seq
931 aa
AA seq
DB search
MNDFIPGQRWISNTESELGLGLILEVEFNRVAVLFLATGEKRLYAKDNAPLTRVSFAVGD
IIESVEYQKITVEHIEEHQGLLTYIGLDEDGQLQQIDEMELNHHIQFNKPQDRLFTGQFD
PTNWFLLRYETWRRQQQHQQSAVKGMQGVRAALIPHQLYIAQQAANRAMPRIMLADEVGL
GKTIEAGLIIHHRLINGLSRRVLILVPESLLHQWLVEMLRRFNLRFSIFDESRCQVSDDN
PFSNEQLILCSQNFFSQYPDRQQQVLAAGWDLVVVDEAHHLEWSEAQASPEYLFVEQLAQ
TSPGLILLTATPEQLGKESHFARLRLLDPDRFYQFQQFLAEESQFQPVAELANLLISGQS
LSVAAQSQLQDLLKNDKVDKLLAQVNEQTTEPQDSRHPFGLSNVREELVKLLLDHHGTGR
ILFRNSRQTVSGFPDRQHYGYPLTGNDSSDLQHSPYLAWLVEKLKALGDERALLICHRAE
TVIQLEQLLRQHVGHTAAVFHEGMTIIERDRAAAFFVDDESRAQVLICSEIGSEGRNFQF
VRHLILFDLPENPDLLQQRIGRLDRIGQRHVIQIHIPYLLNSAQHVLYRWYDEGLDAFRH
NCSGAAQVYKLVQAQLHDALHSADSASIDTLVALTREINLQVAAELHKGRDLLLELNSCR
SEEAAELVAEIKAAETDGSLWPYMESIFDCYGVDVEDHSRDCHILWPSENLRIAHFPMLQ
DDGLTVTVNREIALRREDMQFISVEHPMVLAAMDLVLSSETGNAAVSVVKHPQLKPGQFL
LELLFVAECSAPPELQIGRFLPPTPLRVLLDQNKKDLSAIIAHNALVETGDSFDKNQISQ
FLNSQRQHILDMIRTSEQLVSQKLQQLVSESSNRMITALTGEIKRLVRLKQINPGIKDQE
IEQLKETTLLSHESIQDAQLRLDAVRFVITS
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattttatacccggccaacgctggattagcaataccgaatcagaactgggtctg
ggtctgattctggaagtcgaatttaatcgggtcgccgtgctgtttctggccacaggtgaa
aagcgactctatgccaaagacaacgcgccgctgacccgagtcagttttgcagtgggcgat
atcattgaatcggtggaatatcaaaaaatcaccgtagaacacatcgaagaacatcagggt
ttgctgacctatatcggcctggacgaagacggccaactgcagcaaattgacgagatggaa
ttaaaccatcacattcagttcaacaagccgcaggatagactgtttaccggtcagtttgat
cccaccaactggtttttactgcgttacgaaacctggcgccgccaacaacagcatcaacaa
tctgccgttaaaggcatgcagggcgtcagagctgcgctgattccacaccagctgtacatt
gcccagcaagctgccaatcgggccatgccgcgcatcatgctggccgacgaagtaggtttg
ggcaaaaccatagaagccggtttgattattcatcaccgtctgattaacggtttaagtcgg
cgggttttgattttagtcccggaaagtttgttacaccaatggctggtggaaatgctcagg
cggtttaatctacgcttcagtattttcgacgaaagccgttgtcaggtcagtgacgataat
ccgttcagcaacgaacaactgatcttatgcagccaaaacttctttagccaatatcctgac
cgccagcaacaagtgctggccgccggctgggatttggtggtggtggacgaagctcatcat
ctggaatggagtgaagcacaggccagcccggaatatctattcgtggaacagctggcgcaa
accagccctggtttgatactgctgactgcaaccccagaacagttgggtaaagaaagtcat
tttgcccgcttacgcctgctcgatcccgaccggttttatcaatttcaacaatttttggcg
gaagagagccagtttcagccggtggcagaactggccaatttgctgatttccggccagtca
cttagcgtagcggcccaaagccagttacaagacctgctgaaaaacgacaaggtcgataaa
ttactggcccaggtaaatgaacaaactaccgagccgcaggacagccgtcatccatttgga
ttgagcaatgtccgcgaagaactggtgaaattactgctggaccatcacggcactggccgc
atcctgtttcgcaattcccggcaaaccgtcagcggctttccagaccgccagcattatggt
tatccactgaccggcaatgacagcagcgatttgcagcacagcccctatttggcctggctg
gtagagaagcttaaagccttgggtgatgaacgcgcgctgttgatctgccatcgcgccgaa
accgtgattcaactggagcaattgctcagacagcatgtcggtcataccgctgccgtgttc
cacgaaggcatgacaattatcgaacgtgaccgtgccgctgccttttttgtcgacgacgag
agccgcgcccaagtgctgatctgttcggaaatcggcagcgaaggccgcaactttcagttt
gtgcgccatctgattttgtttgatctgccggaaaacccggatttactgcaacaacgcata
ggccggctggaccggattggtcagcgccatgtcatccagattcatattccgtatttgctc
aactctgcgcagcacgtgctgtaccgctggtatgacgaaggtctggatgccttccgccat
aactgttccggtgcagcccaggtttataaactggtgcaagcacaattgcacgacgccttg
cacagtgcagatagtgccagcattgatacactggtggcactaacacgcgagattaacctg
caagtggcggcggaactgcacaaaggccgggatttgttactggagctcaactcctgccgt
agcgaagaagccgccgagctggttgccgaaatcaaagccgctgaaactgacggcagtttg
tggccgtatatggaaagcatattcgattgctatggtgtcgatgtggaagatcattcccgc
gattgccatatcctttggcccagtgaaaacctgcggattgcccatttccccatgctgcag
gatgatggtttgaccgtcaccgtgaatcgcgagatagcattaagacgcgaagacatgcaa
tttatcagtgtggaacatcctatggtgctggcagccatggatctggtactttccagtgaa
accggcaatgccgccgttagcgtagtcaaacatccgcaactaaaacccggccagttttta
ctggagctgttattcgttgccgaatgcagtgcgccgccggaattacaaatcggtcgtttc
ctgccgcccacaccattgcgggtgttattggatcagaataaaaaagacttatcggccatt
atcgcgcacaatgccttagttgaaaccggcgacagttttgataaaaatcagatcagccag
tttttaaatagtcagcgtcagcatattcttgatatgattagaacttctgagcaattagtc
agtcaaaaactgcagcaattggtcagcgaaagcagtaaccgtatgattactgctcttacc
ggcgaaatcaaacgcctggttcgtctgaaacaaatcaaccccggcatcaaggatcaggaa
atcgagcagcttaaggaaaccacgctgctgtctcatgaaagcatacaggacgcccaatta
cgcctggatgccgtacgctttgtgattaccagttaa
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