Methylomonas paludis: KEF85_12095
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Entry
KEF85_12095 CDS
T07508
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mpad
Methylomonas paludis
Brite
KEGG Orthology (KO) [BR:
mpad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpad03021
]
KEF85_12095 (rpoH)
Transcription machinery [BR:
mpad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KEF85_12095 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
PsbQ
HTH_25
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
QWF70087
UniProt:
A0A975MLM5
LinkDB
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Position
2709011..2709868
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AA seq
285 aa
AA seq
DB search
MNNNLALPINLSVGTFDAYLSLLTRMPKLTAEQEHELAIRYRDSGDLEAARELVMSNLRF
VAHVARGYAGYGLPLADIVQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIKAEIHEYVIKN
WRIVKVATTKAQRKLFFNLRKHKKDSNQLSQIDAEAIATSLEVDIKTVYEMEQRLESHDI
GFEPYSDDSSESASMAPIAYLEQHGADPAQLLENSDWEERKEDILLQAMNDLDERSRDIL
KSRWLMAEKATLHELAERYQVSAERIRQLEQNAMKKLKNAVVLEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaatctggctttaccgatcaatttatcggtcgggacatttgatgcttatcta
agcctcttgacccgtatgcctaaactgacggcagagcaagaacacgaactggctatccgt
taccgggacagcggcgatctggaagctgcccgcgaactggtcatgtcgaatctgcgcttt
gttgctcatgtggcacgtggttatgccggctacggcctgcctttggcggacattgttcag
gaaggcaatatcgggctgatgaaagccgtaaaacgctttgacccggatatgggcgtgcgt
ctggtttcctttgctgtacactggattaaagctgaaattcacgagtatgtgattaaaaac
tggcgtattgtcaaagttgcaacgaccaaggcgcaacgcaaactgttttttaatctgcgc
aagcacaaaaaagattcaaaccagttatcgcaaattgatgctgaagccattgccacttct
ttggaagtagacattaaaaccgtttacgaaatggaacaacgcctggaaagtcatgatatt
ggctttgagccctattctgacgacagcagtgaatctgccagcatggcccccattgcttat
ctggaacaacatggtgctgatccggcccagctattggaaaacagcgactgggaagagcgc
aaggaagatatcttgctacaggccatgaacgacctggatgagcgcagccgcgacatttta
aaaagccgctggttaatggccgaaaaagccaccctgcacgaactggccgagcgttatcag
gtgtccgccgagcgcatcagacagctagaacagaatgccatgaagaaactaaaaaacgcg
gtggtgctagaagcctga
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