Methylomonas paludis: KEF85_12355
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Entry
KEF85_12355 CDS
T07508
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mpad
Methylomonas paludis
Pathway
mpad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mpad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KEF85_12355 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpad03019
]
KEF85_12355 (orn)
03009 Ribosome biogenesis [BR:
mpad03009
]
KEF85_12355 (orn)
Messenger RNA biogenesis [BR:
mpad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KEF85_12355 (orn)
Ribosome biogenesis [BR:
mpad03009
]
Eukaryotic type
Pre-60S particles
RNases
KEF85_12355 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QWF70133
UniProt:
A0A975MLL5
LinkDB
All DBs
Position
complement(2758846..2759391)
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AA seq
181 aa
AA seq
DB search
MSQDAANLIWIDLEMTGLDPDRDLIIEIATIVTDKNLNILAQGPVFAVHQSEAALAGMDE
WNQTHHGQSGLINRVRNSQISTAEAESLTLDFLKNWLLPRTSPMCGNSICQDRRFLYRYM
PKLEAFFHYRNLDVSTVKELAARWAPQLNDGFKKKAAHQAMDDILESIEELRYYREQFFK
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggacgctgccaacctgatctggattgatttggaaatgaccggactcgatccg
gatcgtgatttaattatcgaaatcgccaccattgttaccgataaaaatctgaatatcctt
gcccaaggtccggtatttgctgtacatcaaagcgaagcggcactggccggcatggatgaa
tggaaccagactcaccatggccagtccgggctgatcaatcgggtgcgtaactcccagatt
agcactgctgaagccgaaagcctaaccctggattttttaaaaaactggttgctgcccaga
acttcgcccatgtgcgggaatagcatctgccaggacagacggtttttataccgctatatg
cccaaactggaagccttttttcattatcgtaatctggatgtatccaccgtcaaagaactg
gctgctcgctgggcgccacagctaaacgacggcttcaagaaaaaagcagcccatcaagcc
atggatgatattctggaatccatagaagagctacgctattaccgcgaacaattttttaaa
ttttaa
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