Methylomonas paludis: KEF85_13770
Help
Entry
KEF85_13770 CDS
T07508
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mpad
Methylomonas paludis
Pathway
mpad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KEF85_13770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpad03019
]
KEF85_13770
03009 Ribosome biogenesis [BR:
mpad03009
]
KEF85_13770
Enzymes [BR:
mpad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KEF85_13770
Messenger RNA biogenesis [BR:
mpad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KEF85_13770
Ribosome biogenesis [BR:
mpad03009
]
Prokaryotic type
rRNA helicases
KEF85_13770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
CMS1
AAA_19
Cas3-like_C_2
HEM4
Motif
Other DBs
NCBI-ProteinID:
QWF70392
UniProt:
A0A975MM85
LinkDB
All DBs
Position
3040358..3042091
Genome browser
AA seq
577 aa
AA seq
DB search
MSDPSATTPSFKDLGLSESLLKALESVGYETPSPIQAEIIPFVMAGRDVLGQAQTGTGKT
AAFALPVLSRLDVNQKDPQVLVLAPTRELAIQVAEAFQRYASHIKGFHVLPIYGGQDYTT
QLRQLNRGAHVIVGTPGRVMDHMRRGTLKLEFLKTLILDEADEMLRMGFIDDVEWILEQT
PASRQTALFSATMPTEIRKIAQKYLNNPEQVTIKVKTATAANIRQRYWFVSGIHKMDALT
RILEAENFDGMIIFVRTKTATIEVAEKLEARGFSASAINGDMSQALRERAIENLKSGKLD
ILIATDVAARGLDVDRITHVVNYDIPYDTESYIHRIGRTGRAGRTGDAILFVSPREKRLL
ANIEQATKQKVEEMQLPSTEFINNTRITRFKQRITDTLAAEELSFYSQLINQYQVEHDVP
AADIAAALAKLLQGDTPLLLKEPSKKPRKDDDRKSGDFDRDRDRGPKRERGRSAQVEMEL
FRLEVGRSDGIKPGNIVGAIANETGIDGDHIARIKIEENYSTVELPAGMPKDLLQALKKV
RVGGKTLNISRLDPDLVKKAKSKKRVGSPSKRGKGQE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacccttctgccactacgccttcttttaaagatttgggtttatccgaatcactt
ttaaaagcattagaaagcgttggctacgaaaccccctccccgattcaagccgaaattatt
ccttttgtcatggctggccgcgatgtattgggccaagcccaaaccggtaccggcaaaact
gctgcgtttgctctgccggttttatcccggctggatgtgaatcaaaaagatccacaagtt
ttggttttggcccctactcgcgaactggcgattcaggttgctgaagcttttcagcgttat
gcttcccatatcaaaggctttcatgtactgcccatttacggtggccaggattacactacc
cagttgcgccagttgaatcgcggcgcccatgtgattgtcggcacccctggccgggtaatg
gatcatatgcgccgtggcaccttgaaactggaatttctgaaaaccctgattctggatgaa
gccgatgagatgttgcgcatgggctttatcgacgatgtggaatggatactcgaacagacc
ccagcgtcacgccaaaccgcgctgttctcggcaaccatgcctactgaaatccgcaaaatt
gctcagaaatatctgaacaatccggaacaggttaccattaaggtaaaaaccgctaccgct
gctaatattcgccaacgctactggtttgtcagcggcatacacaaaatggatgcgcttacc
cggattctggaagcggaaaattttgatggcatgattattttcgttagaaccaaaaccgcc
acaattgaggttgcggaaaagctggaagcccgcggcttctcggcttcggccatcaatggc
gatatgtcacaggcactgcgagaacgtgccattgaaaacctgaaaagcggcaagctggat
attttaattgccaccgatgttgccgctcgtggtctggatgtggacaggattacccatgtg
gtgaactacgatatcccttatgataccgaatcctatattcaccggattggccggactggc
cgtgccggtagaacgggtgacgccattctgtttgtttcgccacgggaaaaacgtttgctg
gccaatattgaacaggcaaccaaacaaaaagttgaagaaatgcaattaccttcaacagag
ttcatcaataacacccgtatcacccggtttaaacagcgcattaccgacaccctggccgcc
gaggaattaagtttttacagccagctgattaaccagtatcaggttgaacatgacgtacct
gccgcagatattgcagcggcactggctaaattattacagggtgataccccgttattactg
aaagagcccagcaaaaaaccgcgcaaagatgatgacagaaaatccggcgattttgaccgg
gatcgggatcgcggtccaaaacgggaaagaggccgttctgcacaagtggaaatggagctg
ttccgtctggaagtaggtcgtagcgatggcattaagcccggtaatattgttggtgctatc
gccaacgaaaccggcattgatggcgatcatattgccagaattaaaattgaagaaaattac
agcacagtggaattgccggctggaatgcctaaagatctgttacaggctttgaaaaaagtc
cgggtcggcggcaaaactttgaatatttcccgactggaccctgatctggtcaagaaagcc
aagagtaaaaaacgcgtaggctcaccgtctaaacgcggcaaaggccaagagtaa
DBGET
integrated database retrieval system
