Methylomonas paludis: KEF85_14960
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Entry
KEF85_14960 CDS
T07508
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mpad
Methylomonas paludis
Pathway
mpad03030
DNA replication
mpad03430
Mismatch repair
mpad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KEF85_14960 (dnaE)
03430 Mismatch repair
KEF85_14960 (dnaE)
03440 Homologous recombination
KEF85_14960 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpad03032
]
KEF85_14960 (dnaE)
03400 DNA repair and recombination proteins [BR:
mpad03400
]
KEF85_14960 (dnaE)
Enzymes [BR:
mpad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KEF85_14960 (dnaE)
DNA replication proteins [BR:
mpad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KEF85_14960 (dnaE)
DNA repair and recombination proteins [BR:
mpad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KEF85_14960 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QWF70606
UniProt:
A0A975MMI3
LinkDB
All DBs
Position
3279826..3283326
Genome browser
AA seq
1166 aa
AA seq
DB search
MQPNFIHLRIHTEFSLLDGIVRIKPLVAKLAQFGMPAAAVTEQSNMFSLVKFYKAAQGAG
IKPLIGADVLIFNEEEPSAPFRLTLLARNQKGYITLTELISQGYQHGQHQGIPMLQKSWL
AANHQGLIALSGAMEGDVGVALLADNLAQAKLCAEFWQNLFPDSFYIELQRVGKADEERY
LKQVIALATELTLPVVATNDVRFINKTDFDAHEVRVCINQGRVMDDSRRPRNYTDQQYLR
TAQEMAELFTDIPEALANSVEIAKRCNVELTLGENYLPDFPVPEGMTLDSYFKEASRQGL
EERLQQYAPIGKGSFTENRLVYDERLETELTVITQMGFSGYFMIVADFIQWAKKNAIPVG
PGRGSGAGSLVAYALKITDLDPIEFDLLFERFLNPERVSMPDFDIDFCMERRDEVIDYVA
EHYGRDHVSQIITYGSMAAKAVIRDVGRVMSMSYGFVDRLAKLIPFEIGMTLEKALRDSP
ELKALYDSEEDVKSLIDMARSLEGISRNAGKHAGGVVISPTKLTDFSPLYCEQGGGNLVT
QFDKDDVEAVGLVKFDFLGLRTLTIIDWALQTINQQRAQRNEAPVDISQIPRDDAASYEL
LKKAQTTAVFQLESRGMKELIKKLKPDCFDDIIALVALFRPGPLESGMVDDYINVKHGAK
AEYAHPLLIPILSPTNGVILYQEQVMQIAREMAGYTLGGADMLRRAMGKKKPEEMAKQRE
IFTQGAVKNDIAESIASYIFDLMEKFAGYGFNKSHSAAYALVAYQTAWLKAHYPAAFMAA
VMSSDMDNTDKVVVLIEECREMKLEICPPDLNVSAYRFTVNTKNQIVYGMGAIKGVGEAA
IEDLLEERKHNGLFSGLYDLCKRVDLRKVNRRVLEALIRAGALDGINPNRAAHLAELTTA
LRVAEQHGKMAEAGQNDLFGLAVQVEVSDGENEAYSSFVEPWTEKEKLDGEKQTLGLFLT
GHPINEYLPELKHITYGSLGSLQADAERSRGKMEGRYAGMIVDMRTRQTKQGKMMGFATL
DDRSGRLEVAAYSEVYNKYRDLLNKDMLLVAEGSLGFDDFTNSLRLTADKLYSIDQAREV
FARGLVLRWHHAEWPAERPFSDELLAILQPFAGGMCPVSIDYTTPTAKAILQLGDEWRVR
PCDELLIKLRRFLAAENVELRYTNKL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaaactttatccatctcagaattcataccgaattttccctgcttgacggcatc
gtcagaattaagccgctggttgccaaactagctcagtttggcatgcccgccgccgcagtt
accgagcaaagcaatatgttttcgctggtaaagttttacaaggcagcgcaaggtgccggc
atcaaacccctgattggcgcggatgtactgattttcaatgaagaagaacccagcgcccct
ttccggctgactttactggcacgcaatcaaaaaggttatatcaccctgaccgaactgatt
tctcaaggctatcagcatggccaacatcagggcatccctatgctgcaaaaaagctggctg
gccgccaaccatcaaggactgattgctttatccggagccatggagggcgatgtgggcgta
gccttactggccgacaaccttgctcaggccaaactttgcgccgaattttggcaaaactta
tttccagacagtttttatattgaattacagcgagtaggtaaagcagatgaagaacgttat
ctaaaacaagtcatagcgctggcaacagaattgacactgccggtcgtggcaaccaatgat
gtacgctttatcaataaaaccgattttgacgcccatgaagtgcgggtatgtatcaaccag
ggccgcgtcatggacgacagccgtcgcccccgcaattataccgatcagcaatatttacgc
acagcccaagaaatggccgagttatttaccgatatccccgaagcattggcaaacagcgtg
gagattgccaaacgctgtaatgtagaattaaccctgggcgaaaattatctacccgacttt
ccagtgcctgagggaatgacgctggacagttactttaaagaagcttcccggcagggcctg
gaagaacgcctgcagcaatacgcaccgataggcaaaggcagttttaccgaaaaccgccta
gtgtatgacgaacgcctggaaaccgaattaaccgtgatcacccagatggggttttccggc
tattttatgatcgtagcagactttatccaatgggcaaaaaaaaatgccatcccagtgggg
ccgggccggggttccggcgccgggtcgctagtggcttatgcgctaaaaatcaccgatctt
gatccgatagaattcgacctgctatttgagcgctttcttaaccccgaacgggtatccatg
ccggattttgatatcgacttttgcatggaacgccgggatgaagtcattgattatgtggcc
gagcattatggccgcgaccatgtttcccagattattacctatggttcaatggcggcaaaa
gcggtaatccgcgacgtgggccgggtaatgtcaatgtcctacggtttcgtggacagacta
gccaaattgataccattcgaaatcggcatgaccctggaaaaagctttgcgggacagcccc
gaactaaaagccctgtatgacagcgaagaggatgttaaatcgctgattgatatggcccgc
tcactggaaggcatctcccgaaatgccggcaaacatgccggcggcgtggttatctccccc
accaaactaacagactttagccccttgtactgtgaacaaggcggcggcaacctagttacc
caatttgacaaagatgacgtggaagcagtgggcctggtcaagtttgactttctaggctta
cgcaccctaaccataatcgattgggcgctgcaaaccatcaaccaacaacgcgcccagcgc
aacgaagccccggtcgacatcagccaaattccccgtgacgatgccgccagttatgagtta
ttaaaaaaagcccagaccaccgccgttttccagctagagtcgcgcggcatgaaagaactg
atcaaaaaactaaagccggactgttttgatgacattattgccctagtggcattattccgt
cccggcccactggaatcgggcatggtggacgattacatcaacgttaaacacggcgccaaa
gccgaatacgcccatcccctcctgataccgattttaagccctaccaatggcgttattctg
tatcaggaacaagtaatgcaaatcgccagggaaatggccggctataccctgggcggagca
gacatgctgcgccgagctatgggtaagaaaaaacccgaagaaatggccaaacaacgggaa
atctttacccaaggcgcagttaaaaatgacatagccgaatcaattgccagctacattttc
gacttgatggaaaaatttgccggttatggttttaataaatcccattccgcagcttatgca
ctggtagcctaccaaaccgcctggttaaaagcccattatccggcagcctttatggcagcg
gtaatgtcatcggacatggataatactgacaaggtagtggtactaatcgaagaatgccgg
gaaatgaagctggaaatttgtccgcccgatctgaacgtatccgcttaccggtttacagtt
aataccaaaaaccaaatcgtctacggcatgggcgccatcaaaggcgtgggtgaagccgca
attgaagatttgctggaagaacgcaaacacaatgggcttttttccggcttatatgattta
tgcaaacgggtagacctgcgcaaagttaaccggcgagttttggaagcactaataagagct
ggggcactggatggcattaaccccaaccgggccgcgcatctggcagaattaaccaccgca
ctgcgggtagccgaacaacacggcaaaatggccgaagccggccagaatgatttatttggc
ctggcagtacaagtggaagtaagcgatggcgaaaacgaagcctattccagctttgtagaa
ccctggacagaaaaagagaaactggatggcgaaaaacagaccctagggctatttttaacc
ggccatcccattaatgaatatctgccggaattaaaacacatcacctacggcagcctgggc
agcctgcaagccgatgccgaacgctccagaggcaaaatggaaggccgttatgccggcatg
atagtggacatgcgcacccggcaaaccaagcaaggcaaaatgatgggctttgccaccctg
gatgaccgcagtggccgcttggaagtggcggcttatagcgaagtttataataaataccgg
gatttgctgaacaaagatatgttactggttgccgaaggcagcctgggatttgacgacttt
accaacagcctgcgcctaaccgccgacaagctgtacagcatcgatcaggccagagaagta
tttgccagaggcctggtattgcgctggcatcacgcggaatggccggcagagcgcccattt
agcgatgagctgctggccattttgcagccgtttgccggcggcatgtgtccagtgagtata
gattacaccacccccaccgccaaagccatactgcagctgggtgacgaatggcgggtgcgg
ccctgcgacgaattgctgattaaactacggcggttcttggccgctgagaatgtggagtta
aggtataccaacaaactttag
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