Methylomonas paludis: KEF85_15175
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Entry
KEF85_15175 CDS
T07508
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
mpad
Methylomonas paludis
Pathway
mpad02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mpad00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KEF85_15175 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpad03000
]
KEF85_15175 (nifA)
Transcription factors [BR:
mpad03000
]
Prokaryotic type
Helix-turn-helix
Other families
KEF85_15175 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
GAF_2
AAA_5
Mg_chelatase
AAA
AAA_2
GAF_3
HTH_23
bpMoxR
AAA_3
Motif
Other DBs
NCBI-ProteinID:
QWF70643
UniProt:
A0A975MMK8
LinkDB
All DBs
Position
complement(3327593..3329119)
Genome browser
AA seq
508 aa
AA seq
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MSERLLMVESELDTLFLVSQLLNSTHDLRSKLKGILEILHKRSGLHFGMITLRDVDDDSM
SICEIYGDGIDRSIRYQPGEGLVGAILDEGSTIVVERIADEPRFLSRLGVYNPDLPFIGS
PLAIEQGEVVGILAAQPCNAKFLGERARFMEMVANLIAHSVNMLRVMERKQHELASERDY
LKQTLVKNYRFENIIGHSEPMLKVFDIIRQVAKWHTTVLIRGESGTGKEVVASSIHFNSA
CANGPFLKLNCAALPDTLLESELFGHEKGAFSGAIGQRKGRFELADNGTLFLDEIGEISA
SFQAKLLRVLQEGEFERVGGVRTLKVNVRIIAATNRNLEQEVAEGNFREDLYYRLNVMPI
NMPPLRERIEDIPELAAFLLNRISKQQGGRALEIKESAIRILMKHDWPGNVRELENRLER
AAIMSAEGIIDREVIASTGLESEIGISRNTYAVKHVDLHDENMDERERVIAALEQSGWVQ
AKAARLLDMTPRQIAYRIQTLNINVKQI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacgcttgctgatggtggagtccgaactggataccctgtttctggtcagtcaa
ctgctaaacagcacgcacgatttacgcagcaagctcaagggtattctggaaattttgcat
aaacgttcgggtttgcattttggcatgattaccctgcgagatgtggatgatgacagcatg
agcatttgcgaaatatacggggatggtattgatcgcagtattcgctaccaaccgggagag
ggtttggtgggggcgatactggatgaaggcagtaccattgtcgtggaacggattgctgac
gaaccgcgttttctgagtagattaggggtttacaatcccgacttgccttttataggttca
cctttggctatagaacaaggtgaagtcgtcggcattttggcggcgcaaccctgcaatgcc
aaatttctgggtgagcgggcccgatttatggagatggtggccaatttaattgcccacagc
gtcaatatgctccgcgtcatggagcgtaaacaacacgaattggccagtgagcgcgattat
ctcaagcagacactggtgaaaaactatcggtttgaaaacatcattggtcattccgaacct
atgttaaaagtttttgatatcatccgccaggtggccaaatggcataccactgttttgata
cgcggcgaatccggtactggtaaagaagttgtagccagttctattcatttcaattctgca
tgtgccaatggtccgtttctgaaattgaattgtgccgcattacccgataccttgctggaa
tccgaattatttggtcatgaaaaaggtgcgttcagtggcgccatcggtcagcgtaaaggc
cgtttcgaactggctgataatggcaccctgtttttggacgaaatcggcgaaatttctgca
tcatttcaggccaaactgctgcgggttttacaggaaggcgaatttgagcgggtcggtggt
gtcagaacactgaaagttaatgtgcgaattatcgctgctaccaatcgcaatttggagcag
gaagtggccgaaggcaattttcgtgaagatttatattatcgcctgaatgtcatgcccatc
aatatgccgccactgcgcgagcgtatagaagatatcccggaattagccgctttcctgtta
aaccgcatttccaaacagcagggtggtcgggcgctggaaatcaaggaaagtgcgattcgt
attctaatgaaacacgactggccgggtaatgttcgcgaattggaaaaccgcctggaacgt
gctgccatcatgagcgcagaaggtattatcgatcgtgaagtcattgccagcaccggtttg
gaaagcgagatcggtattagtcgcaatacctacgcagtcaaacatgtcgatttgcacgat
gaaaatatggatgaacgcgaacgggtaatcgctgctctggagcaaagcggctgggtgcaa
gccaaggccgcgcgcctgctggatatgacgcccaggcaaattgcctatcgcatccaaacc
ttaaatatcaatgtcaaacagatttaa
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