Methylomonas paludis: KEF85_16345
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Entry
KEF85_16345 CDS
T07508
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mpad
Methylomonas paludis
Brite
KEGG Orthology (KO) [BR:
mpad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpad03032
]
KEF85_16345 (gyrB)
03400 DNA repair and recombination proteins [BR:
mpad03400
]
KEF85_16345 (gyrB)
Enzymes [BR:
mpad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KEF85_16345 (gyrB)
DNA replication proteins [BR:
mpad03032
]
Prokaryotic type
DNA Topoisomerases
KEF85_16345 (gyrB)
DNA repair and recombination proteins [BR:
mpad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KEF85_16345 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Mit_ribos_Mrp51
Motif
Other DBs
NCBI-ProteinID:
QWF70859
UniProt:
A0A975MNE9
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All DBs
Position
3581602..3584007
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AA seq
801 aa
AA seq
DB search
MSDQYDSSNITVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGYCKGVD
VVIHENGSISVYDDGRGIPVDIHKEEGRSAAEVIMTVLHAGGKFDDNAYKVSGGLHGVGV
SVVNALSEELTLKIRKNGKLHMQKYKLGEPVAPLAVIGDCQGSGTYINFIPSPTIFTNIE
FHYEILAKRLRELSFLNSGVRISLRDERSGKEDVFEFEGGISAFVQHLNKNKTPLFEKVF
HFIAEKEGVTVEVAMQWNDSYQENVFCYTNNIPQRDGGTHLAGFRGALTRTINQYIESSG
LAKKEKVSTTGDDAREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKPLVESTMNEKLQEYL
LEHPQIAKAIVNKIIDAARAREAARKAREMTRRKTTLDIAGLPGKLADCQEKDPALSELF
IVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMISSEEVGTLITALGCGIGKD
EYNIEKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQLPELIEHGYIYIAQPPLYKVKKGK
QEHYVKDDNALNQYLIQLALDKAQLQTDELTPVIQGQGLEKLATEFADVTAVIRRLARRY
DDLYLEQMTYMPVLSDELKADQEKLSAWLLTMQENLNQGGHKAVFSTDLNYRAADDFDIS
VSKRLHGISKTFIFHAPFFSGNDYQKIARYVEKTLSMFGPTSVMRMGEREQQVSSFKQAF
EWMMKEVKKGQHIQRYKGLGEMNPSQLWETTLDANSRRLLQVTINDAVSADEVFTTLMGD
VVEPRRDFIVKNALDVANLDI
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccaatacgatagttcgaatatcacagtcttgaaaggcctggatgctgtcaga
aaacgtcccggcatgtatatcggcgacaccgatgatggttctggcctgcatcacatggtt
ttcgaagtcgtggataactccatagatgaagccttggccggttattgtaagggtgtggat
gtggtgatccatgaaaacggctcaatctcggtatacgatgatggtcgtggtataccagtg
gatatccacaaagaagaaggccgctcagctgccgaagtaattatgaccgtgctacatgcc
ggtggtaaatttgatgataacgcctacaaagtttccggtggtttgcatggggttggggta
tcagtggtcaatgctttgtccgaagagctgacgctgaaaattcgcaaaaacggcaaactg
catatgcagaagtacaagctgggtgaaccggtagcgccgctggcggttattggcgactgt
caaggcagcggcacctatatcaactttatccccagcccgaccatttttaccaatatcgag
tttcattacgaaattctggccaagcgcttacgcgaactgtcgtttcttaattccggggta
cgcatctctttaagagacgaacgcagcggtaaagaagacgtgtttgaatttgaaggcggc
atcagcgcttttgtgcagcatctgaacaaaaacaaaacaccgctgtttgaaaaagtattt
cattttattgccgaaaaagaaggcgtaaccgtagaagtggctatgcagtggaacgactcc
tatcaggaaaacgtattctgctacactaacaacattccccagcgtgacggcggcacccat
ttagccggttttagaggcgcattaacccgcaccatcaatcaatacattgaaagtagtggt
ttggccaaaaaagaaaaagtgtctactactggcgatgatgcccgcgaaggtttgacagca
gtattatcggtaaaagtacccgatcccaagttttcctcacaaaccaaagataaactggtg
tcttctgaagtgaaaccattggtggaatccaccatgaacgaaaaacttcaggaatatttg
ctggaacacccgcaaattgccaaagccatcgtcaacaaaatcatagatgccgccagagcc
cgcgaagccgcccgtaaggccagagaaatgacccggcgcaaaaccactctggatatcgcc
ggattacccggcaaactggctgactgtcaggaaaaagacccggctttgtctgaactgttt
atagtggaaggggactcagcgggcggctccgccaaacagggccgtgatcgccgtactcag
gctatcctgcccttgaaaggtaaaattcttaatgtggaaaaagcccgcttcgataagatg
atatcttccgaagaggttggtaccctgatcaccgcgttgggctgcggcatcggcaaagac
gaatacaatattgaaaaactgcgttatcaccgcatcatcatcatgactgacgcggacgtg
gacggttcgcatatccgcaccctgctgttgacctttttttaccggcaattgccggaactg
atcgaacacggctatatctatatcgcccagccacctttatacaaagttaaaaaaggtaaa
caggaacattacgtcaaagacgataacgccttaaaccaatacctgattcaattggcatta
gataaagcccaactgcaaactgatgaacttaccccggtgattcagggccagggcctggaa
aaactggcgaccgagtttgccgatgtcaccgccgtgattcggcgtctggccagacgctat
gacgacttgtatctagagcaaatgacgtatatgccagtgctcagtgacgaactgaaagct
gatcaggaaaaattatcagcctggttgttaaccatgcaggaaaatctgaatcaaggcggc
cataaagccgtattcagtaccgatttaaactaccgggcagcagatgattttgatatcagt
gtcagcaaacgcttacacggtatcagtaagacttttatattccatgctccgttcttcagc
ggtaatgattatcaaaaaatcgcccgctacgtggaaaaaaccttaagcatgtttggccca
acctcagtgatgcgtatgggcgagcgtgagcagcaggtcagcagctttaaacaagccttt
gaatggatgatgaaggaagttaaaaaaggtcagcatatccagcgctacaaaggcttgggc
gaaatgaaccccagtcagctgtgggaaaccactttggatgccaatagccgccgcttgtta
caggtaactattaacgatgccgtttctgcagacgaagtgttcaccaccctgatgggcgat
gtggtggaaccgcgtcgggactttattgtgaagaatgcactggatgtggctaatttggat
atatag
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integrated database retrieval system
