Mycolicibacterium pallens: K0O64_00600
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Entry
K0O64_00600 CDS
T07675
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mpae
Mycolicibacterium pallens
Pathway
mpae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K0O64_00600 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpae03400
]
K0O64_00600 (recB)
Enzymes [BR:
mpae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K0O64_00600 (recB)
DNA repair and recombination proteins [BR:
mpae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0O64_00600 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
AAA_22
PDDEXK_1
ResIII
Motif
Other DBs
NCBI-ProteinID:
QYL17131
LinkDB
All DBs
Position
121986..125285
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AA seq
1099 aa
AA seq
DB search
MDQFDLLGPLPEHCSTTVLEASAGTGKTFTLAGLVTRYVAEGRARLDQMLLITFGRAATQ
ELRERVRQALQDALRAFDDSELAQHNDVLAALTTGEEGDLADRKRRLRDALAGFDAATIA
TTHQFCHLVLKSLGVAGDTDSSVTLAESLDELVAEIVDDLYLAHFGQEREHPPITRSEAL
KLAREVVANPCTELRPLNPEPGSQPAVRVGFANDVLAELDRRKRRRGILSYDDLLGRLAD
ALETPDSPAATRMHQRWSVVMVDEFQDTDPVQWQVIERAFSGQSTLILIGDPKQAIYAFR
GGDIFTYLHAAKTAGQRRTLGVNWRSDSLLVDRLQTVLGGAELGDPDIKVLPVQARHDGH
RLAGAPHNDPFRLRVVSRESFGQRGTRTIRMDALRAHIAADLAADIAGLLASTATFCGEP
LKAHHVAVITESHADARACFDALVTAGVPAVYTGDTDVLKSQAADDWLSLLEAFDQLYRP
GLVRAAATTMFFGKTAEDLADGGDELTDRIADTLRQWADHAREAGVAAVFEAAQLAGMGR
RVLSWAGGERNMTDLAHVTQLLHDVAHREHLSLTALRDWLRTQRDERSGAPERNRRLDSD
AAAVQIMTVWVSKGLQFPIVYLPLAFNRYVRSEDLVRFHDEERRCLHVGGDQSAELATAQ
RLGRQESAGEETRLTYVAMTRAQSQVVAWWAPSWDEPNGGLSRLLRGRRPGQSTVPDRCD
PERVDDADAMALLRAWETAGGPVLEESVIVPAAELAGPAQREDLGVRHFHRGIDTTWRRT
SYSGLIRAAETTGVTSEPEVIQLDDEVTDIAVSTPPAGADLPSPMADLPTGAKFGSLVHA
VLETADPFAADLAGELQTQIDRHAVWWPVDVAPAELAAALVPMHDTPLGPLADGLTLRQI
GLRDRLCEMDFEFPLAGGDLAAVRPDIRLADVGRLLGEHLPADDPLVPYVERLSGGALGG
QSLRGYLSGSVDAVLRIPDGVGHRYLVVDYKTNWLGEADRPLSAADYDRARMAEAMLHSD
YSLQALLYSVVLHRFLRWRQPGYDPEHHLGGVLYLFVRGMCGPDTPTTDGHPAGVFSWRP
PATLVMSVSDLLDGRRAAA
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggaccaattcgatctgctgggaccgttgccggaacactgctcgacgacggttctggag
gccagcgccgggaccggcaagacgttcacgctcgccggactggtgacgcgctatgtggca
gaaggccgggccaggctggatcagatgctgttgatcacgttcggccgggcggccacccag
gaactgcgggagcgggtgcgtcaggcgctgcaggatgcgttgcgcgcgttcgacgattcg
gagctggcccagcacaacgatgtgctggccgcgctgaccaccggggaggagggcgacctc
gccgaccgtaagcggcgcctgcgtgacgcgctggccggcttcgacgcggcgacgatcgcc
accacccatcagttctgccacctggtgctgaaatcccttggggttgcaggggataccgat
agcagcgtcacacttgccgagagcctcgacgagctcgtcgctgagatcgtcgacgacctg
tacctggcccacttcggccaggagcgcgagcatccgccgatcacccgcagcgaggccctc
aaactggcccgcgaggtggtcgccaacccgtgtaccgagctgcgaccgctgaacccggag
cccggatcgcaacccgcggtgcgggtcgggttcgccaatgacgttctcgccgagctggac
cggcgtaagcggcggcgcggcatcctcagctacgacgacctactgggccggcttgcggac
gcgctggaaacgccggactcaccggccgcaacccggatgcatcaacggtggtcggtggtg
atggtcgacgagttccaggacaccgacccggtgcagtggcaagtgatcgagcgggccttc
agcggtcagtcgaccctgatcctcatcggcgatccgaaacaggcgatctatgccttccgt
ggcggtgacatctttacctatctgcatgccgccaagaccgcgggccagcgtcgcacgctc
ggggtgaactggcgcagcgactcgctactggtggatcgcctgcagacagtgctcggcgga
gccgaactcggcgatcccgacatcaaggtccttccggtgcaggcacgccacgacggacac
cggctggccggcgccccgcacaacgatccgttccggctgcgagtcgtcagccgagagagc
ttcggccagaggggaacccgcaccatccggatggatgcgctgcgcgcgcacatcgccgcc
gacctggctgccgacatcgccgggttgttggcgagcacggccacgttctgtggtgagccg
ctgaaagcgcatcacgtcgcggtcatcaccgagagccacgccgacgcgcgggcgtgcttc
gacgcgctggtgaccgccggtgtgcctgcggtctacaccggtgacaccgacgtgctgaaa
tctcaggccgccgacgactggctgagcctgctggaggccttcgaccagttgtatcggccc
gggctggtccgggccgcggccaccacgatgttcttcggcaagacggccgaagaccttgcc
gacggcggtgacgagctgaccgaccggatcgcagatacgttgcggcagtgggccgatcat
gcccgtgaggcgggcgtggcggcggtgttcgaggctgctcagctggcgggtatgggccgg
cgggtgctgtcctgggcgggcggtgaacgcaacatgaccgacctcgcgcacgtcacccag
cttctgcacgacgtcgcgcatcgggaacatctgagcctgaccgccttgcgcgattggctg
cgcacacagcgcgatgagcgcagcggcgccccggagcgcaaccgccggctcgacagtgac
gcggcggcggtgcaaatcatgacggtgtgggtcagtaagggtttgcaattcccgatcgtg
tacctgccgttggcgttcaatcgctatgtccgcagcgaagacctggtccggttccacgac
gaggaacgccgctgcctgcacgtcggtggcgaccagagcgccgagctggctaccgcccag
cggctcggcaggcaggagtctgccggcgaggagacccggttgacctatgtcgcgatgacc
cgggctcagtcgcaggtggtcgcgtggtgggcgccgtcgtgggacgaacccaacggcggc
ctgtcgcgtctgctgcgaggccgccgtcccgggcagagcacggtaccggaccggtgtgat
cccgagcgggtcgacgacgccgatgcgatggccctgctgcgggcctgggagacggcggga
ggaccggtgctcgaggagtcggtcatcgtcccggcggctgaactggccggcccggcgcag
cgagaagacctcggcgtcagacactttcaccgtggcatcgacacgacgtggcggcgcacc
tcctattccgggctgatccgcgccgcggagaccacgggagtgaccagtgagccggaggtg
atccagctcgacgacgaggtaaccgacatcgcggtcagcacgcccccggccggcgccgac
ctgccgtcgccgatggcggacctgccgaccggcgcgaaattcggcagcctggtgcacgcg
gtgctcgagaccgccgacccgttcgccgctgatctggcgggcgagctgcagacccagatc
gaccggcacgcggtgtggtggccggtggacgtcgcccccgccgagttggcggcggcgctg
gtgccgatgcacgacaccccgctggggccgttggccgacggtctgaccctgcgccagatc
gggttgcgtgatcggttgtgcgagatggatttcgaattcccgctggccgggggtgatctg
gctgcggtgcgacccgacatccggctggctgacgtcggccgactgctcggcgaacatctg
ccggctgatgacccgctggtgccgtacgtcgagcggctcagcggcggcgcactcggaggg
cagtcgctgcgcggctacctgtccgggtcggtcgatgccgtgctgcgaatacccgacggc
gtcgggcaccgctacctggtggtcgactacaagaccaactggctgggggaggccgaccgc
ccgctgtccgccgccgactatgaccgcgcgcggatggccgaggcgatgctgcattccgac
tactcgctgcaggcgttgctgtacagcgttgtgctgcaccgtttcctgcggtggcgccag
cccggctacgaccccgaacaccacctcggcggtgtgctgtatctgttcgtccgcggcatg
tgcggacccgacacccccaccaccgacgggcaccccgccggagtcttcagctggcggccg
ccggcgacgctggtgatgtcagtgtccgacctgctcgacggacggcgggcggcggcatga
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