Mycolicibacterium pallens: K0O64_11280
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Entry
K0O64_11280 CDS
T07675
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mpae
Mycolicibacterium pallens
Pathway
mpae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K0O64_11280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpae03019
]
K0O64_11280
Messenger RNA biogenesis [BR:
mpae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K0O64_11280
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QYL19018
UniProt:
A0ABX8VMJ1
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Position
2291709..2293388
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AA seq
559 aa
AA seq
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MNEELSPPGPLAPGGLRVTALGGINEIGRNMTVFEHLGRLLIIDCGVLFPNHDEPGVDLI
LPDLRLIEDRLDDIEALVLTHAHEDHIGAIPYLLKMRGDIPVVGSKFTLALVAAKCREHR
ITPSFVEVAEGQRSTHGVFECQYFAVNHSIPDALAIAIHTGAGTVLHTGDIKLDQLPLDG
RPTDLPGMSRLGDAGVDLFLCDSTNSEIPGVGPSESEVGPNLHRLMRGAEGQRVIVACFA
SNVDRVQQIVDAAIALGRRVSFVGRSMLRNMAIARELGFLHVDDRDVVDIAMAEEMAPGQ
VVLITTGTQGEPMAALSRMSRGEHRSITITSDDLIILSSSLIPGNEEAVYGVIDDLAKIG
ARVVTNQQVRVHVSGHAYSGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAARSGVPEEN
IVVAESGVSVDLVGGRVSIAGAVPVGKMFVDGLISGDVGEATLGERLILSSGFVAIVVVL
NRESGRPAGPPHLYSRGFSEDPKALEPVARNVEAELESLASDNVTDPVRIAQVVRRTVGK
WVGETYRRQPMIVPTVIEI
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggagctgtcgcctcccgggccgctggccccgggaggtctgcgcgtgacggcg
ctgggcggcatcaacgaaatcggccgcaacatgaccgttttcgagcatcttggccgactg
ctgatcattgactgcggggtgctgttcccgaaccacgatgagcctggcgtcgacttgatc
cttcccgacctgcggctgatcgaggaccgcctcgacgacatcgaagccctggtgctgacc
cacgcccacgaagaccacatcggggcgattccgtacctgctcaagatgcgcggagacatc
ccggtggtgggctccaagttcaccctcgcgctggtggccgcgaaatgccgtgagcaccgg
atcaccccctcgttcgtcgaggtcgccgagggacagcgcagcacccatggcgtgttcgaa
tgccagtacttcgcggtcaaccactcgatccccgatgcactggcgatcgccatccacacc
ggtgcaggcaccgtcctgcacaccggtgacatcaagctcgaccagttgccgctcgacggc
cgccccaccgatctgccgggcatgtcgcggttgggtgacgccggggtggacctgttcctg
tgcgactcgaccaactccgagatccccggcgtggggccgtcggaaagcgaggtcggcccg
aatctgcaccggctcatgcgcggcgccgaagggcagcgggtcatcgtggcgtgcttcgcc
tccaatgtcgaccgcgtgcagcagatcgtcgatgccgcaatagcattgggccggcgggtt
tcgttcgtcggccggtcgatgctgcggaatatggccatcgcccgcgagctgggcttccta
catgtcgatgaccgcgacgtcgtcgacatcgcgatggccgaggagatggcccccgggcag
gtcgtgctgatcaccaccggtacgcagggcgagccgatggcggcgctgtcccggatgtcg
cgcggggagcaccgcagcatcacgatcacctccgatgacctgatcattctgtcgtcgtcg
ctgatccccggcaatgaagaagcggtctacggagtcatcgacgacctggccaagattggt
gcccgagtggtcaccaatcagcaagtgcgggtgcacgtttcgggccatgcctactccggt
gagctgttgttcctctacaacggggtgcggccgcgcaatgtgatgccggtgcatgggacg
tggcgcatgctgcgggccaacgccaagctggccgcgcgcagcggtgtgcccgaagagaac
atcgtggtggccgagagcggcgtcagcgtcgacctcgtcggtggccgggtgtcgatcgcc
ggtgccgtgccggtcggcaagatgttcgtcgacggactgatctccggcgacgtgggcgag
gcgacattgggcgagcggctcatcctcagctcgggcttcgtcgcgatcgtcgtcgtcctg
aaccgggagtccggccggccggccggaccgccacacctgtactcgcgtggcttctccgaa
gatcccaaggcgctggagccggtggcgcgcaatgttgaagcggagctggaatcgcttgct
tccgacaatgtcaccgacccggtgcgcatcgcgcaggtcgtgcgccgcacggtcggaaag
tgggtgggggagacctaccgccgccagccgatgatcgtgccgacggtcatcgaaatctag
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