Mycolicibacterium pallens: K0O64_14225
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Entry
K0O64_14225 CDS
T07675
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpae
Mycolicibacterium pallens
Pathway
mpae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K0O64_14225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpae03019
]
K0O64_14225
03400 DNA repair and recombination proteins [BR:
mpae03400
]
K0O64_14225
Enzymes [BR:
mpae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K0O64_14225
Messenger RNA biogenesis [BR:
mpae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K0O64_14225
DNA repair and recombination proteins [BR:
mpae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K0O64_14225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
AAA_30
MarR_2
Glyco_hydro_57
Cas3-like_C_2
PcrA_UvrD_tudor
LSDAT_prok
Motif
Other DBs
NCBI-ProteinID:
QYL19535
LinkDB
All DBs
Position
2893214..2894830
Genome browser
AA seq
538 aa
AA seq
DB search
MSRRTELQRVAKDMFRWPELRPAQLEAMEAVLAGRDVLAVMATGSGKSAIYQVPAVLIDG
ATLVVSPLIALQRDQISGLASTEAPEAVAINSQLGSHDIARNWQAVREHAAEYVFLAPEQ
LTNDDVLTALAQMDISLVVVDEAHCVSAWGHDFRPSYLRIADSIARFGGPPVVALTATAS
PVVRREIVEHLRLRDPLVIASGFDRPNIGLEVSHYVADDDKRDAVLARMLTVERPALLYT
ATRKDTETYAAQLNSFGVTARAYHAGLSRAQRDEVHELFRADHGVDVVVATSAFGMGIDK
ADVRTVVHASIPDSMDTYYQQIGRAGRDGKPATAALFYRPEDLGLARFFTTNRPDEELLA
RVYADLDRRAPKRLGDLRTRLAVRGPRVTNALNLLEEAELVCSTRDGFTRSSSIGVEEAV
HRAVEIVERNERIDRTRVEMMRGYAETRECRRQFLLGYFGEPLPEPCGNCDNCASGVVDD
EPPATDRWAVQTPVEHREWGSGVVMGAEDDRITVLFDEFGYRTLLLESIEHSGVLTRR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcggacggagctgcagcgggttgccaaagacatgttccggtggccggagttg
cggcccgctcaactcgaggcgatggaggcggtgctcgccggccgcgacgtgctggcggtg
atggcgaccggctccggcaagtcggcgatctaccaggtgcccgccgtgctcatcgacggc
gccacgctggtcgtctcaccgctgatcgcactgcaacgcgaccagatcagcgggctggcg
tccactgaagcccccgaggcggtggccatcaactcgcaactgggcagtcacgacatcgcg
cggaattggcaggcggttcgcgagcacgcagccgaatacgtgttcctcgcgcccgaacag
ctcaccaacgatgacgtcctcaccgcgttggcccagatggacatttcgttggtggtcgtc
gacgaagcgcactgtgtctcggcgtggggtcacgacttccggccgagctatctccggatc
gccgacagcatcgcaaggttcggcggcccgccggtcgtcgcgctgaccgccaccgcctcg
ccggtggtgcgccgcgagatcgtcgagcatctgcgcttgcgcgatccgctggtgatcgcc
agcgggttcgaccggcccaacatcggcctcgaggtgtcccactacgtcgccgacgacgac
aagcgcgatgcggtactggccaggatgctgacggtcgaacggcctgccctgctgtacacc
gcgacccgcaaggacactgaaacatatgccgcgcaattgaattcgttcggcgtcactgct
cgcgcctaccatgccggtttgtcgcgcgcgcaacgcgacgaggtccacgagctgttccgg
gccgaccacggtgtggacgtggtggtggcgacgtcggcgttcgggatgggcatcgacaag
gccgacgtacgcaccgtcgtgcacgcctcgatcccggactccatggacacgtactaccag
cagatcgggcgcgccggtcgcgacgggaaaccggcgacggcggcgctgttctaccggccg
gaggatctgggcctggcccggttcttcaccaccaaccggcccgacgaggagctgctggca
cgggtctatgcggatctggatcgccgggctccgaaacggttgggcgacttgcgtacccgg
ctcgcagtgcgggggccgcgggtgaccaatgccctcaacctgctcgaggaggcggaactg
gtctgctcgacgcgggatggtttcacccgcagcagcagtatcggagtcgaggaggcggtg
caccgggctgtcgagatcgtcgagcgcaacgaacgcatcgaccgcactcgtgtcgagatg
atgcgcggatatgccgagacgcgggagtgtcgtcgtcagttcctgctgggctatttcggg
gagccgttgcccgagccgtgcggcaattgcgacaactgtgcctccggcgtcgtcgacgac
gagccgcccgccacggaccgctgggcagtgcagacgccggtcgagcatcgggagtggggt
tccggggtggtgatgggcgccgaggacgaccggatcaccgtcctgttcgacgaattcggc
tatcgcacactgctgctggagtccatcgagcattccggggtgctgacccgccgatga
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