Mycolicibacterium pallens: K0O64_19565
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Entry
K0O64_19565 CDS
T07675
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mpae
Mycolicibacterium pallens
Pathway
mpae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K0O64_19565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpae03019
]
K0O64_19565
03009 Ribosome biogenesis [BR:
mpae03009
]
K0O64_19565
Enzymes [BR:
mpae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
K0O64_19565
Messenger RNA biogenesis [BR:
mpae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K0O64_19565
Ribosome biogenesis [BR:
mpae03009
]
Prokaryotic type
rRNA processing factors
K0O64_19565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
PCB_OB
EAD1
BUD22
Motif
Other DBs
NCBI-ProteinID:
QYL15313
LinkDB
All DBs
Position
complement(3988739..3991645)
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AA seq
968 aa
AA seq
DB search
MANDDLYQDLPENPTPSQWEPPAPTAGDDLPERLRVHSLARVLGTTSRRVLDALSELDGR
TRSPHSSVDRTDAVRVRDVLAASPEVSAEEPVEAAAVVAGDTTAAEPESTDVAETPETPE
TAEEPESRLILETTTSVETVEQSAFMPLFVAPQPVEAEPKHRKVEDDDEAEDDDEDDEAT
AESDDDQSERPANRRRRRGRRGRGRGRGEQGGPEGEGGDDAERAEGDETAESGDESDSDD
EDSDDESSTGEGATRRRRRRRRRKTGGGDDSESGSADDPPNTVVHERAPRNKDKDPDAIQ
GISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLARREAVERVMVVRDKIRTEPPHEGA
RYTQIAVMEDGVVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVDIGRGRNGVLYAG
EVNWEAAGLGGAQRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSLAGRYLVYVPGAS
STGISRKLPDTERQRLKEILRDVVPDDAGVIIRTASEGVKEEDIRGDVERLQERWTKIAE
EAERVKGNKAGAAVALYEEPDVLVKVIRDLFNEDFSGLIVSGDDAWQTINDYVNSVAPDL
VSKLTKYEPAGGPDGPDVFAVHRIDEQLAKALDRKVWLPSGGTLVIDRTEAMTVVDVNTG
KFTGAGGNLEQTVTKNNLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESNRDLVLRRLTEA
LGRDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTTCTHCAGRGIVLHADPVDTAQAAG
RKSESGSGGGGGRRGKRGKRGRTETDEAPVAKVPQHTSEHPMFKAMAAANGKHEDDEAEE
ELADELERETEGEESEEALETVEEAAEDVAEEDLDDDSDDEDSDDDEDDEIDVDLDEDDE
DLDEDNLDVDDDDEDDDSDDDDDDLDDEDDADSDEYDDDQPVVAPEPVVPERRPRRRAAA
RPAGPPTS
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
gtggccaacgatgacctctatcaggatctacccgaaaaccccaccccgtcgcagtgggaa
cccccggcgccgaccgccggtgacgacctgcccgaacgcttgagggtgcattcgctggca
cgggtgctcggcaccaccagccggcgcgtgctggacgccctcagcgagctcgacggccgc
acccgaagcccgcactcgagcgtagaccgcaccgacgcggtgcgggtgcgcgacgtcttg
gcggccagccccgaggtcagcgccgaagagcccgtcgaggccgctgccgtcgtggccggg
gacaccacggctgccgagcccgagtcgaccgatgtcgccgagacgcccgagacgcccgag
acggccgaggagccggagtcgcggctgatcctggaaaccaccacctctgtcgagaccgtc
gagcagtcggccttcatgccgctgttcgtcgcgcctcagcccgtcgaagccgagcccaag
catcgcaaggtcgaggacgacgacgaggccgaagacgacgacgaggacgacgaggccacc
gccgaatccgacgacgatcagtccgaacgtcccgccaaccggcggcggcgccgtggccgc
cgtggccgtggccgcggccgtggcgagcagggcggtccggagggtgagggcggagacgac
gccgagcgggccgagggcgacgaaaccgccgagtccggtgacgagtccgacagcgatgac
gaggacagcgacgacgagtcgagcaccggtgagggtgcgacccgccggcgccgcaggcgg
cggcgccgcaagaccggtggcggtgacgactccgagagcggctcggccgacgatccgccg
aacaccgtcgtccacgagcgcgccccgcgcaataaggacaaagacccggacgcgatccag
ggcatcagcggctccacccgcctggaggccaagcggcagcgccgccgcgacggccgcgac
gccggccgccggcgcccgccgatcctgtccgaggccgaattcctggctcgccgcgaggcc
gtcgaacgcgtgatggtggtgcgcgacaagatccgcaccgaaccaccgcatgaaggggct
cgctacacccagatcgccgtcatggaagacggtgtcgtcgtcgagcactttgtgacgtcg
gcggcgtcggcttcgctggtcggcaacatctatctcggcatcgtgcagaacgtgctgccc
tcgatggaggcggcgttcgtcgacatcggccgcggccgcaacggtgtgctctacgccggc
gaggtcaactgggaagccgccgggctcggcggcgcgcagcgcaagatcgaacaggccctc
aagcccggcgactacgtcgtcgtccaggtcagcaaggacccggtcggccacaagggtgcg
cggctgaccacccaggtgtcgctggccgggcgctacctggtctacgtgccgggtgcgtcg
tcgaccgggatcagccgcaagctgcccgacaccgaacgccagcggctcaaggaaatcctg
cgcgacgtggtgcccgacgatgccggcgtgatcatccggaccgcctcggagggcgtcaag
gaagaagacatccgcggcgacgtcgaacgcctccaggagcgctggaccaagatcgccgag
gaagccgagcgggtcaagggcaacaaggccggcgccgccgtcgcgctgtacgaagagccc
gacgtgctggtcaaggtgatccgcgatctgttcaacgaagacttctccgggctgatcgtc
tccggcgacgacgcctggcagaccatcaatgactacgtcaattccgttgctcccgacctt
gtttcgaagctgacgaagtacgagccggcgggtgggcccgacggcccggacgtgttcgcc
gtgcaccgcatcgacgagcagctggccaaggcgttggaccgcaaggtgtggctgccctcg
ggcggcacgctggtgatcgaccgcaccgaggcgatgacggtcgtcgacgtcaacaccggc
aagttcaccggtgcgggcggcaacctcgagcagacggtcaccaagaacaacctcgaggcg
gccgaggagatcgtgcgccagctgcggctgcgcgatatcggcggcatcgtggtcatcgac
ttcatcgacatggtgctggagtccaaccgcgacctggtgctgcggcggctgaccgaggcg
ctgggccgtgaccgtacccgccatcaggtgtcggaggtgacctcgctcggcctggtccag
ctgacccgcaagcggctgggcaccgggcttgtcgaggcgttctccaccacctgtacgcac
tgcgccgggcggggcatcgtgctgcacgccgatccggtcgacacggcccaggcagccggg
cgcaagtccgagtcgggcagcggcggcggtggtggccgacgcggcaagcgcggcaagcgc
ggccgtaccgagaccgacgaagcgccggtggcgaaggttccgcagcacaccagtgagcac
ccgatgttcaaggcgatggcggcggccaacggcaagcacgaggacgacgaggccgaagag
gagctcgccgacgagctcgagcgggagaccgagggcgaggagtccgaagaggctctcgag
accgtcgaggaggccgccgaggatgttgccgaggaagacctggacgacgactccgacgac
gaggattccgacgacgacgaggacgacgaaatcgacgtcgacctcgacgaagacgacgag
gacctcgacgaggacaacctcgacgtcgatgacgacgacgaagacgacgactccgacgac
gatgacgacgacctcgacgacgaggacgacgccgactccgacgaatacgacgatgaccag
ccggtcgtggcgccggagccggtggtgccggaacggcgtccgcggcgccgggcagcggct
cgaccagcggggccgccgacgtcctag
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