Mycolicibacterium pallens: K0O64_22040
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Entry
K0O64_22040 CDS
T07675
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mpae
Mycolicibacterium pallens
Pathway
mpae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K0O64_22040 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpae03021
]
K0O64_22040 (rho)
03019 Messenger RNA biogenesis [BR:
mpae03019
]
K0O64_22040 (rho)
Transcription machinery [BR:
mpae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
K0O64_22040 (rho)
Messenger RNA biogenesis [BR:
mpae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K0O64_22040 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
Fungal_virus_P2_C
NACHT
VWA_2
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QYL15735
UniProt:
A0ABX8VD87
LinkDB
All DBs
Position
complement(4518242..4520146)
Genome browser
AA seq
634 aa
AA seq
DB search
MTDTDLITAAERAPQTEAPAVTAESAPDSRPDTSSQAAPSGDAGPTGSLSTMVLPELRAL
ANRVGVKGTSGMRKSDLIAAIKEHQNGGNGGNGTAPRGDDTAEKAPAEQPVEKAPAEQPA
EARETAAENNAENTETNGGEPRRRERRTATREAGAAGSDNAEQPKSQDNRPEQGEKKSEN
RESAGGQQNQNRGDNQNQNRGNNQNRDNDGDDDDRQGRRGRRFRDRRRRGERQGGEGGGG
NDTELREDDVVQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNMVRKNGLRRGDAVTGA
VRVPKEGEQNNQRQKFNPLVRLDSVNGGPVEAAKNRPDFTKMTPLYPNQRLRLETTSDRL
TTRVIDLIMPIGKGQRALIVSPPKAGKTTIMQDIANAITRNNPECHLMVVLVDERPEEVT
DMQRSVKGEVIASTFDRPPSDHTQAAELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNA
SPASGRILSGGVDSTALYPPKRFLGAARNIEHGGSLTIIATAMVETGSTGDTVIFEEFKG
TGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLSPDEFAIVHKLRRVLSGLDSHQAID
LLMSQLRKTKNNYEFLVQVSKTAPGGPAGNGDLD
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacctgatcacggctgcagaacgcgccccgcagacggaggcgcccgcc
gtgaccgcagaatcggcgcctgattctcggccggacacctcctcgcaagccgcccccagt
ggggacgccggcccgaccggctcgctctcgacgatggtcctgcccgagcttcgtgccctg
gccaaccgcgttggcgtcaagggaacctccggaatgcgcaagagcgatttgatcgccgcc
atcaaggagcaccagaacggcggcaacggcggcaatgggaccgccccccgcggcgacgac
actgccgagaaggcgccggccgagcagccggtcgagaaggcgcccgccgagcaaccggcc
gaggcccgcgagaccgccgccgagaacaacgccgagaacaccgaaaccaatggtggtgag
ccgcgccgccgcgagcgccggacggccacccgcgaggccggcgccgccggctccgacaac
gctgagcagccgaaatctcaggacaaccgccccgagcagggcgagaagaagtccgagaac
cgcgagtccgccggcggccagcagaaccagaaccgcggcgacaaccagaaccagaaccgc
ggcaacaaccagaaccgcgataacgacggcgacgacgacgaccgtcagggtcggcgcggc
cgccggttccgtgatcgtcggcgccgcggtgagcggcaaggcggcgagggcggcggcggc
aacgacaccgaactgcgcgaggacgacgtcgtccagccggtcgccggcatcctcgacgtg
ctggacaactacgcgttcgtccgcacctcgggctacctggccggccccaacgacgtctac
gtctcgatgaacatggttcgcaagaacggcctgcgacgcggcgacgccgtcaccggcgcg
gtccgcgtgccgaaggaaggcgagcagaacaaccagcggcagaagttcaacccgctggtg
cgcctcgacagcgtcaacggcggcccggtcgaggcggccaagaaccgccccgacttcacc
aagatgaccccgctgtacccgaaccagcggctgcgtctggagaccacctccgaccggctg
accacccgtgtgatcgacctgatcatgccgatcggcaagggtcagcgtgccctgatcgtg
tcgccgcccaaggccggtaagaccacgatcatgcaggacatcgccaacgcgatcacccgc
aacaaccccgagtgccacctgatggtggtcctcgtcgacgagcgtcctgaagaagtcacc
gacatgcagcgctcggtcaagggtgaggtcatcgcctcgaccttcgatcgcccgccgtca
gaccacacccaggccgccgagctggccatcgagcgggccaagcgcctggtcgaacagggt
aaggacgtcgtcgtcctgctcgactcgatcacccgcctgggtcgcgcctacaacaacgcc
tctccggcgtccgggcgcatcctgtccggtggtgtggactcgaccgcgctgtacccgccc
aagcggttcctgggcgcggctcgcaacatcgagcacggcggttcgctgacgatcatcgca
acggccatggtggagaccggttcgaccggtgacaccgtgatcttcgaggagttcaagggc
accggcaacgcggagctcaagctcgaccgcaagatcgccgagcgccgggtgttccccgcg
gtcgacgtcaacccgtcgggcacccgcaaggacgagctgctgctcagcccggacgaattc
gcgattgtgcacaagctgcgccgcgtgctgtccggcctggacagccaccaggccatcgac
ctgctgatgagccagctgcgcaagaccaagaacaattacgagttcctggtgcaggtgtcc
aagactgcgccgggtggcccggccggcaacggcgacctcgactag
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