Mycolicibacterium pallens: K0O64_23820
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Entry
K0O64_23820 CDS
T07675
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mpae
Mycolicibacterium pallens
Pathway
mpae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0O64_23820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpae03400
]
K0O64_23820
Enzymes [BR:
mpae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K0O64_23820
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K0O64_23820
DNA repair and recombination proteins [BR:
mpae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K0O64_23820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
DUF7577
Motif
Other DBs
NCBI-ProteinID:
QYL16042
LinkDB
All DBs
Position
complement(4907367..4908230)
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALADHLRRHAVGQTVGRVDIAALSVLKTFDPPPTALHGQPVTGAARWGKYLG
MQAGGLWLITHLSRAGWLKWSDKLAAAPLKPGKGPIALRVHLGTPGEAAGFDLTEAGTQK
RLAVWIVDDPAKVPGIATLGPDALEIGQEQLAEILKPHSGRIKTVLTDQKVIAGIGNAYS
DEILHVAKLSPFATANKLTAAQLGALHDAMITVLTDAVQRSVGQQAATLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgccggaagtcgaggccttggccgatcatctgcgccggcatgcggtcggc
cagacggtcgggcgcgtcgacatcgcggcgctatcggtgctgaagacgttcgacccgccg
ccgaccgcgctgcacggacagcctgtgacgggcgcggcccgctggggcaagtacctcggt
atgcaggccggcggcctgtggttgatcacccatctgtccagggccggctggctgaagtgg
agcgacaagctcgcggccgccccgctcaagccaggtaagggcccgatcgcgctgcgcgtg
cacctcggaacacccggtgaagcagccggtttcgacctgaccgaggccggcacccagaag
cggctggccgtctggatcgtcgatgacccggccaaggtacctggcatcgcaacgctgggc
cccgacgcgctggagatcggtcaggagcagcttgcggaaatcctcaaaccgcatagcggg
cggatcaagacggtgctcaccgaccagaaggtcatcgccggaatcggcaatgcctacagc
gacgagatcctgcatgtcgccaagctgtcgccgttcgcgacggccaacaagctcaccgcc
gcgcaactgggcgccctgcatgacgcgatgatcacggtgctgaccgatgctgtgcaacgg
tcggtgggtcaacaggcggcaaccctgaagggcgagaagcgatctggactacgggtgcat
gcccgcaccgggttgccctgtccggtgtgcggtgacaccgtgcgcgaggtgtcgttcgcc
gacaaatcgtttcagtactgcccgacctgtcagaccggcggcaaggtgctggccgaccga
aggatgtcacggctgctgaaatag
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