Mycolicibacterium pallens: K0O64_25845
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Entry
K0O64_25845 CDS
T07675
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpae
Mycolicibacterium pallens
Pathway
mpae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K0O64_25845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpae03019
]
K0O64_25845
03400 DNA repair and recombination proteins [BR:
mpae03400
]
K0O64_25845
Enzymes [BR:
mpae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K0O64_25845
Messenger RNA biogenesis [BR:
mpae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K0O64_25845
DNA repair and recombination proteins [BR:
mpae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K0O64_25845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QYL16392
LinkDB
All DBs
Position
complement(5298872..5300962)
Genome browser
AA seq
696 aa
AA seq
DB search
MTATRADAQKILEQLAGPHAVLRDDQWTAIEALVVHRRRALVVQRTGWGKSAVYFLAAKL
LREQGRGPTVIVSPLLALMRNQVGAAGRAGVRAATINSGNVTEWEDIHRQVAAGDLDVLL
VSPERLNNPDFRVQVLPSLAADAGLVVVDEAHCVSDWGHDFRPDYRRIRTLIAELGSGIP
VLATTATANDRVVADVAAQLGVGGGDTVVLRGGLDRESLHLSVVKVPTAAGRVAWIAAQL
NSLEGSGIIYTLTVAAARDLAAVLREQGHQVDAYTGASDPAEREQMEVDLLENRVKALVA
TSALGMGFDKPDLGFVIHLGAPQSPIAYYQQAGRAGRATARAEVILLPGQEDAEIWSYFS
SVAFPPEALVRKVIGALDPERPLSTPALEPLVDLGRTRLEMVLKVLDVDGAVQRVKGGWI
STGQQWTYDDERYRTLDAARRREQQAMLDYQNSASCRMAFLRAQLDDPELAAQDRCGRCD
NCAGSRFSANVDERALDAASDRLRQCGVELAPRRIWPTGMAKLGVDVSGRIDDGPLEGRA
IGRLTDLGWGPLLRRLLDAPDGPVPDEFVRAAIAVLVDWRWETRPDAVMGLDSSTHPILI
RSVVDRLGQVGRLTNAGTLHYRPTRRPVTAVNSAYRVAALHDAWQEPDLAGLQQPPQTVL
LVDDFTDTGWTLTTAARCLRRAGVSQVLPLSLAAVS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgacccgagctgacgcacaaaaaatcctcgagcagctcgccggcccgcacgcg
gtgctgcgcgatgaccagtggacggccatcgaagcgttggtggtccaccggcggcgggcc
ctggtcgtgcaacgcaccggctggggtaagtctgccgtctacttcctcgccgccaagctg
ctgcgtgagcagggccgtgggccgacggtgatcgtctcaccgctgctggcgctgatgcgc
aaccaggtcggcgccgcggggcgcgcgggcgtgcgtgcggcaaccatcaactccggcaac
gtcaccgagtgggaggatattcatcgccaggtcgccgccggtgacctcgatgtgctactg
gtgagcccggagcggttgaacaatccggattttcgcgtccaggtgctgccgtcgttggcg
gccgacgccggtctggtggtggtggacgaagcgcactgcgtctccgactggggacacgac
tttcggccggactaccgccgcatccgaacgttgattgccgaattgggttcaggcataccg
gtgctggccacgacggcgaccgccaacgaccgggtggtcgccgacgtggcggctcaactc
ggcgtcggtgggggcgacacggtggtgctgcggggcggcttggaccgcgaatcccttcac
ctgtcggtcgtgaaggtacccacggctgccggacgtgtggcctggattgcggcacagctc
aattcgctcgaaggctcgggcattatctacaccctgaccgtcgccgccgcacgcgatctg
gcggcggtcctgagggaacagggtcatcaggttgacgcctacaccggggcatcggacccc
gccgagcgggagcagatggaggtcgatctcctcgagaaccgggtcaaggccctggtggcc
acctccgcacttgggatgggattcgacaaacccgatctgggcttcgtgattcacctcggg
gcgccgcagtcaccgattgcgtactaccagcaggccggacgtgccggccgagccaccgcc
cgcgccgaggtgatcctgctcccggggcaggaggacgccgagatatggagttacttctcc
tcggtggcattcccgccggaagcattggtgcgcaaagtgatcggcgctttggatccggag
cgaccgctgtcgacgcccgcgctggaaccgctcgtcgacctcgggcgtactcgacttgaa
atggtgctcaaggtgctcgatgtcgacggtgcggtgcagcgggtgaagggcggttggatc
agtaccggccagcagtggacgtatgacgacgaacgctatcgcactctggacgccgctcga
cgccgcgaacagcaagccatgctcgactaccaaaactcggcgagttgccgaatggctttt
ctccgtgcgcaactcgacgatccagaactggcagcgcaggaccggtgcgggcggtgcgac
aactgtgccggatcccggttctccgccaacgtcgacgagcgggcgcttgacgcggccagc
gaccggctacggcagtgcggcgtcgagctggcaccacggcggatctggccgaccggtatg
gccaagctgggggtcgacgtgagcgggcgtatcgacgacgggccactcgaaggccgcgcg
atcgggcggctcacggatctgggttggggtcccctgctgcgccggctgctcgatgcgccg
gatggtccggtacccgacgagttcgttcgcgccgccatcgccgtgctggtggactggcgg
tgggaaacgcggccggacgcggtcatggggctcgactcgtcgacgcatccgatcctgatc
cggtccgtcgtcgatcgcctcggacaggtgggtcggctgaccaacgcgggaacgctccac
taccgtccgacccgacggccggtgacggctgtgaactcggcctaccgggtcgcggcgctc
cacgacgcgtggcaggagcctgatctggctggcctgcagcaacctccgcaaacggtgctt
ctggttgacgacttcaccgacaccggctggaccttgaccaccgcggcgcgctgtctgcgt
cgggcgggagtgtcgcaggtattgccgctctcgctcgcggcggtgagttaa
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