Microbulbifer pacificus: R5R33_01935
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Entry
R5R33_01935 CDS
T09537
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
mpaf
Microbulbifer pacificus
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpaf03009
]
R5R33_01935 (dbpA)
Enzymes [BR:
mpaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
R5R33_01935 (dbpA)
Ribosome biogenesis [BR:
mpaf03009
]
Prokaryotic type
rRNA helicases
R5R33_01935 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WOX05938
UniProt:
A0AAU0N124
LinkDB
All DBs
Position
452707..454119
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AA seq
470 aa
AA seq
DB search
MSSTPLSSNNAPRDFQTLPLQPSLLQNLQDLGFKQLTEIQAAALPAIVEGRDVIGQAKTG
SGKTVAFGLGVLHKLQPERFRVQALVLCPTRELADQVARELRKLARAIHNIKILTLCGGM
PFGPQIGSLKHGAHIVVGTPGRIEDHIRKGNLDLGEVQTLVLDEADRMLDMGFQAVLDQI
LAELPKERQTLLFSATYPKTIDALATRVLQNPVKVEVTATHTQSTIEQKYYRVENNEERP
AALYQLLANYSPSSAVVFCNTKKETDEAAQSLKSAGFAALALHGDMEQKDRDRTLALFAN
GSASILVATDVAARGLDIEELPMVVNYHLSRDPEVHTHRVGRTGRAGQKGIALTLVSKKE
IYKVERLEEMMQQPITLQEVPAPPKGFAPSRPTMSTLQIDGGKKQKVRAGDVVGALTGEG
GIEGTQIGKIQIFDFSTFVAVERPVAKKALNKLGSGKIKGRNFRARIVGV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtacccccctgtccagtaacaacgccccacgcgacttccagacgttgccgtta
caaccgtctctcctgcagaacctgcaggacctcggcttcaagcagctcaccgaaattcag
gcggcagcgctacctgcgattgtggaaggacgggatgttatcgggcaggccaagaccggc
tcgggcaagaccgtcgcctttggtctcggcgtgctgcacaaactgcagccggagcgcttc
cgcgtgcaggcactggtgttgtgccctacccgcgaactggcggaccaggtcgcgcgcgag
ttgcgcaagctggcgcgggccattcacaacatcaagatcctgaccctgtgtggcggcatg
ccgttcggcccgcaaatcggctcgctcaagcacggcgcacatatcgtggtgggcaccccg
ggccgcattgaagaccatatccgcaagggcaacctcgacctgggcgaagtgcaaaccctg
gtgctcgacgaagcggaccgcatgctcgacatgggtttccaggcggtgctggaccagatc
ctcgccgagctgccgaaggagcgtcagacactgctgttctccgccacctaccccaagacc
attgatgccctggcaacacgggtactgcaaaacccggtgaaagtggaggtgacggcgact
cacacccagagcaccatcgaacagaagtactaccgggtcgaaaacaacgaggagcggccc
gccgcactgtatcagctgctggccaactacagcccctcctccgccgtggttttctgcaac
accaagaaggaaaccgacgaggccgcacagtcgctgaaaagtgccggtttcgcagcgctg
gcactgcacggtgatatggagcagaaagaccgcgaccgcaccctggcgctgttcgccaac
ggcagcgcctcgattctggttgccaccgacgtcgccgcgcgcggactggatattgaagaa
ctgccgatggtagtgaactaccacctgtcccgcgatccggaagtacacacccacagagtc
ggccgtaccgggcgcgcgggccagaaaggcattgccctgacgctggtgagtaaaaaggaa
atctacaaggtcgagcggctggaagaaatgatgcagcagccgattacgctgcaggaagtc
cctgcgccacccaaaggattcgcgccatcccgcccgaccatgtcgaccctgcagatcgac
ggcggcaagaaacagaaagtgcgcgccggtgatgtggtgggcgcgctgaccggcgaaggc
ggaattgaaggcacacagatcggcaagatccagatttttgatttttccacctttgttgca
gtggagagacccgtggccaagaaggcgctgaacaagcttggctcgggaaaaatcaagggc
cgcaatttccgcgcgcggattgtcggtgtgtga
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