Microbulbifer pacificus: R5R33_02260
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Entry
R5R33_02260 CDS
T09537
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mpaf
Microbulbifer pacificus
Pathway
mpaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R5R33_02260 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpaf03400
]
R5R33_02260 (uvrB)
DNA repair and recombination proteins [BR:
mpaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R5R33_02260 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
R5R33_02260 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_5
AAA_22
Kinesin
AAA_16
DUF87
YdhT_N
Motif
Other DBs
NCBI-ProteinID:
WOX05984
UniProt:
A0AAU0N1S6
LinkDB
All DBs
Position
complement(519537..521552)
Genome browser
AA seq
671 aa
AA seq
DB search
MESRPFQVASKYAPAGDQPAAIEALVEGINDGLAHQTLLGVTGSGKTFTMANVIERLQRP
AIVMAHNKTLAAQLYGELRDFFPRNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHI
EQMRLSATKALIERKDVIVVATVSAIYGLGDPDKYLKMVLHLDRGDIVDQRTILRRLAEL
QYTRNDADFRRATYRVRGDIIDIYPADSDLEAVRLSLFDEEIEEITLFDPLTGEVLQKVP
RITIFPKSHYVTPRETILEAIDRIKEELKDRLEQLRENNKLLEAQRLEQRTRYDLEMMQE
LGYCNGVENYSRYLSGRDAGQPPPTLFDYLPHDSLLFIDESHVTVPQIGGMYRGDRSRKE
TLVEYGFRLPSALDNRPLKFEEWEQLSPQTIFVSATPGKYEGEHAGAVVEQVVRPTGLVD
PVVEVRPAATQVDDTLSEIHRCVAADQRVLITVLTKRMAEDLTEYLQDNNVRVRYLHSDI
DTVERVEIIRDLRIGEFDVLVGINLLREGLDMPEVSLVAIFDADKEGFLRSDRSLIQTIG
RAARNLEGRAILYADRITDSMQRALDETERRREKQLQHNAEHGITPKGIRKSVADILEGA
IAPGVPARGRRKVAEKGGTYKADQKPLTEQQRWARIEELEEQMYNHAKNLEFEAAAKLRD
EISRLKEPGDI
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaatccagaccgtttcaggttgccagtaagtatgcgcccgccggcgatcagccggcg
gctatcgaggcgctggtagaaggcatcaatgatggtctggcgcatcagacactgctgggt
gtgaccggctcagggaaaacgttcacaatggcgaacgtcatcgagcggttgcagcggcct
gccatcgtgatggcgcacaacaaaacgctggcggcacagctctacggggagttgcgggat
ttcttcccgcgcaatgcggtggagtatttcgtgtcctattacgactactatcagcctgag
gcctatgtgccttcgtccgatacttttatcgagaaggacgcttccgttaacgagcacatc
gagcaaatgcgcctgtccgccaccaaggcattgattgagcgcaaggatgtgattgtcgtc
gccaccgtttctgccatctacggcttgggtgacccggacaagtacctgaaaatggtgctt
cacctggatcggggcgatatcgttgaccagcgaaccattctgcgccgtctcgcagagtta
cagtacacccgcaatgacgccgactttcgtcgcgccacctatcgcgtgcgcggcgatatc
atcgatatctacccggcagattctgacctggaagcggtacgcctgtcacttttcgatgag
gaaatcgaagaaatcaccctgttcgaccccttgaccggtgaggtgctgcagaaagtgccg
cgcatcaccatctttcccaagtcccactatgtgacgccgcgcgagacgattctcgaagcg
atagatcggatcaaggaggagctgaaggaccgcctggaacagttgcgtgaaaacaacaag
ctgctggaagcgcagcgcctggagcagcgcacccgttacgacctggaaatgatgcaggaa
cttggatactgcaacggtgtggagaactactctcgctatctgtccggtcgcgacgccggg
cagccgccgcccacgctgttcgactatctgccgcacgattccctgttgtttatcgatgag
agtcacgtcactgtgccgcagatcggcggtatgtaccgaggcgaccgttcgcgcaaggag
acgctggtggagtacggcttccggttaccatcggcgctggataaccgcccgctgaaattc
gaagagtgggagcagctctccccgcagaccatttttgtctcggccacaccgggcaagtac
gagggcgagcatgccggcgctgtggtggagcaggtggtccgccccacggggcttgtggac
ccggtggtggaggtgcgtcccgccgctacccaggtggatgacaccctgtcggaaatccat
cgttgcgttgccgctgaccagcgtgtgctgatcaccgtgttgaccaagcgcatggcggaa
gacctgaccgagtatctccaggacaacaatgtgcgggtgcgttatctgcactcggatatc
gacacggtggagcgggtcgagatcatccgtgatctgcgtattggcgaattcgatgtactg
gtgggaatcaacctgctgcgggaaggtttggatatgccggaagtatccctggtggcgatt
ttcgatgcggacaaggagggtttcctgcgctccgatcgctcactgatccagaccatcggt
cgcgctgcgcgtaatctggagggcagggcaattctgtatgcagaccgcatcaccgactcg
atgcagcgggccttggatgaaaccgagcgccgtcgcgaaaagcagttacagcacaacgcc
gagcacgggatcaccccgaaggggattcgcaaaagcgttgcggatatcttggagggggcg
atcgcacccggtgtgcctgctcgcgggcgtcgcaaggtggctgagaaaggtggtacctac
aaggccgaccagaaaccgctcaccgaacagcagcgctgggcccgaatcgaagagctggaa
gagcagatgtataaccacgccaagaacctagaattcgaagcagcggccaaattgcgtgac
gagatttccaggctcaaggagcctggcgacatctaa
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