KEGG   Microbulbifer pacificus: R5R33_04360
Entry
R5R33_04360       CDS       T09537                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mpaf  Microbulbifer pacificus
Pathway
mpaf00010  Glycolysis / Gluconeogenesis
mpaf00020  Citrate cycle (TCA cycle)
mpaf00260  Glycine, serine and threonine metabolism
mpaf00280  Valine, leucine and isoleucine degradation
mpaf00310  Lysine degradation
mpaf00380  Tryptophan metabolism
mpaf00620  Pyruvate metabolism
mpaf00630  Glyoxylate and dicarboxylate metabolism
mpaf00640  Propanoate metabolism
mpaf00670  One carbon pool by folate
mpaf00785  Lipoic acid metabolism
mpaf01100  Metabolic pathways
mpaf01110  Biosynthesis of secondary metabolites
mpaf01120  Microbial metabolism in diverse environments
mpaf01200  Carbon metabolism
mpaf01210  2-Oxocarboxylic acid metabolism
mpaf01240  Biosynthesis of cofactors
Module
mpaf_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mpaf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mpaf_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
mpaf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mpaf_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mpaf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    R5R33_04360 (lpdA)
   00020 Citrate cycle (TCA cycle)
    R5R33_04360 (lpdA)
   00620 Pyruvate metabolism
    R5R33_04360 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    R5R33_04360 (lpdA)
   00640 Propanoate metabolism
    R5R33_04360 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    R5R33_04360 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    R5R33_04360 (lpdA)
   00310 Lysine degradation
    R5R33_04360 (lpdA)
   00380 Tryptophan metabolism
    R5R33_04360 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    R5R33_04360 (lpdA)
   00670 One carbon pool by folate
    R5R33_04360 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mpaf04147]
    R5R33_04360 (lpdA)
Enzymes [BR:mpaf01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     R5R33_04360 (lpdA)
Exosome [BR:mpaf04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   R5R33_04360 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_binding_2 GIDA Pyr_redox_3 FAD_oxidored FAD_binding_3 NAD_binding_8 DAO HI0933_like AlaDh_PNT_C Thi4 3HCDH_N Lys_Orn_oxgnase 2-Hacid_dh_C DUF3373
Other DBs
NCBI-ProteinID: WOX06368
UniProt: A0AAU0N352
LinkDB
Position
complement(955308..956750)
AA seq 480 aa
MSEKFDVIVIGSGPGGYVAAIRAAQLGLKTACVEKWVNKEGKTINGGTCLNVGCIPSKAL
LDSSWKYHEAKDALDVHGIETGKVKIDVKKMIERKDGVVKQMSGGIAGLFMANKVTSIQG
TGKLLAGKKVEVTDKDGNVTVYEAENVILASGSVPVNIPPAPVDNKIIVDSTGALEFTDV
PKRLGVIGAGVIGLELGSVWNRLGADVVVLEALDSFLAIMDQQIAKESQKILKKQGLDIR
LSCRVTGSEVKGKEVVVTYQDKEGNEHQETFDKLIVCVGRRPFTEGLLSEDAGVKLDERG
FIYVNDLCMTSAPGVWAVGDVVRGPMLAHKASEEGVVVAERIAGQKPMMNYDVIPNVIYT
HPEIAAVGRTEEQVKADGEPYNIGVFPFVASGRAVAANETAGMVKIIAHAETDRVLGAHI
VGPSAADLVQQVAIAMEFGSSAEDIGMTVFGHPTLSETVKEAALAVNGHAIHIANRKKRK
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgtcagaaaaatttgacgtaatcgtaatcggctctggccccggcggttatgtggccgca
atccgcgcagcgcagctgggtctgaaaactgcctgtgttgaaaaatgggtcaacaaagaa
ggcaagaccatcaacggtggtacttgtctgaacgtgggctgtatcccctccaaggcgctg
ctggacagctcctggaaataccacgaagcgaaagacgctctcgacgtgcacggtattgaa
accggcaaggtcaagatcgacgtcaagaaaatgatcgagcgcaaagacggcgtggtgaag
cagatgtctggcggtatcgccggtctgttcatggccaacaaagtgacctccatccagggt
accggcaagctgctggctggcaagaaagtggaagttaccgataaagacggcaacgtcacc
gtctacgaagccgagaacgtgatcctggcttccggctctgttccggtgaacattccgccg
gcgccggtagacaacaaaatcatcgtcgactccaccggtgcactggaattcaccgacgta
ccgaagcgcctgggcgtaatcggcgcgggtgtaatcggcctggaactgggctccgtatgg
aaccgtctgggtgccgacgtggttgtgctggaagccctcgacagcttcctggccatcatg
gaccagcagatcgccaaggaatcccagaagatcctgaaaaaacagggtctggatattcgc
ctgtcctgtcgcgtaaccggcagtgaagtaaagggcaaggaagttgtcgttacctaccag
gacaaggaaggtaacgagcatcaggaaactttcgacaagctgatcgtgtgcgtgggccgt
cgcccgttcaccgaaggcctgttgtctgaagacgccggtgtaaaactggacgagcgcggc
ttcatctacgttaacgacctgtgcatgacttctgcaccgggcgtatgggcggtaggtgac
gtggtgcgcggcccgatgctggcgcacaaggcctcagaagaaggcgttgtggttgccgag
cgcatcgctggccagaagccgatgatgaactacgacgtgatcccgaacgtgatctacacc
cacccggaaattgccgcggtaggtcgtaccgaagagcaggttaaagcggacggcgaaccc
tacaatatcggtgttttcccgtttgttgcttccggtcgtgcagtcgccgcgaacgaaact
gcgggtatggtaaaaattatcgcgcatgcagaaaccgatcgcgtactgggcgcccacatt
gttggcccgtctgctgccgatctggtgcagcaggtggcgattgcgatggaattcggttcc
agtgcggaagacatcggcatgaccgtattcggtcacccgaccctgtctgaaaccgtgaag
gaagcggcacttgcggtgaacggccacgcgattcatatcgccaaccgtaaaaagcgcaag
taa

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