Microbulbifer pacificus: R5R33_04360
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Entry
R5R33_04360 CDS
T09537
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mpaf
Microbulbifer pacificus
Pathway
mpaf00010
Glycolysis / Gluconeogenesis
mpaf00020
Citrate cycle (TCA cycle)
mpaf00260
Glycine, serine and threonine metabolism
mpaf00280
Valine, leucine and isoleucine degradation
mpaf00310
Lysine degradation
mpaf00380
Tryptophan metabolism
mpaf00620
Pyruvate metabolism
mpaf00630
Glyoxylate and dicarboxylate metabolism
mpaf00640
Propanoate metabolism
mpaf00670
One carbon pool by folate
mpaf00785
Lipoic acid metabolism
mpaf01100
Metabolic pathways
mpaf01110
Biosynthesis of secondary metabolites
mpaf01120
Microbial metabolism in diverse environments
mpaf01200
Carbon metabolism
mpaf01210
2-Oxocarboxylic acid metabolism
mpaf01240
Biosynthesis of cofactors
Module
mpaf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mpaf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mpaf_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
mpaf_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mpaf_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
R5R33_04360 (lpdA)
00020 Citrate cycle (TCA cycle)
R5R33_04360 (lpdA)
00620 Pyruvate metabolism
R5R33_04360 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
R5R33_04360 (lpdA)
00640 Propanoate metabolism
R5R33_04360 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
R5R33_04360 (lpdA)
00280 Valine, leucine and isoleucine degradation
R5R33_04360 (lpdA)
00310 Lysine degradation
R5R33_04360 (lpdA)
00380 Tryptophan metabolism
R5R33_04360 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
R5R33_04360 (lpdA)
00670 One carbon pool by folate
R5R33_04360 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpaf04147
]
R5R33_04360 (lpdA)
Enzymes [BR:
mpaf01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
R5R33_04360 (lpdA)
Exosome [BR:
mpaf04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
R5R33_04360 (lpdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_binding_2
GIDA
Pyr_redox_3
FAD_oxidored
FAD_binding_3
NAD_binding_8
DAO
HI0933_like
AlaDh_PNT_C
Thi4
3HCDH_N
Lys_Orn_oxgnase
2-Hacid_dh_C
DUF3373
Motif
Other DBs
NCBI-ProteinID:
WOX06368
UniProt:
A0AAU0N352
LinkDB
All DBs
Position
complement(955308..956750)
Genome browser
AA seq
480 aa
AA seq
DB search
MSEKFDVIVIGSGPGGYVAAIRAAQLGLKTACVEKWVNKEGKTINGGTCLNVGCIPSKAL
LDSSWKYHEAKDALDVHGIETGKVKIDVKKMIERKDGVVKQMSGGIAGLFMANKVTSIQG
TGKLLAGKKVEVTDKDGNVTVYEAENVILASGSVPVNIPPAPVDNKIIVDSTGALEFTDV
PKRLGVIGAGVIGLELGSVWNRLGADVVVLEALDSFLAIMDQQIAKESQKILKKQGLDIR
LSCRVTGSEVKGKEVVVTYQDKEGNEHQETFDKLIVCVGRRPFTEGLLSEDAGVKLDERG
FIYVNDLCMTSAPGVWAVGDVVRGPMLAHKASEEGVVVAERIAGQKPMMNYDVIPNVIYT
HPEIAAVGRTEEQVKADGEPYNIGVFPFVASGRAVAANETAGMVKIIAHAETDRVLGAHI
VGPSAADLVQQVAIAMEFGSSAEDIGMTVFGHPTLSETVKEAALAVNGHAIHIANRKKRK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaatttgacgtaatcgtaatcggctctggccccggcggttatgtggccgca
atccgcgcagcgcagctgggtctgaaaactgcctgtgttgaaaaatgggtcaacaaagaa
ggcaagaccatcaacggtggtacttgtctgaacgtgggctgtatcccctccaaggcgctg
ctggacagctcctggaaataccacgaagcgaaagacgctctcgacgtgcacggtattgaa
accggcaaggtcaagatcgacgtcaagaaaatgatcgagcgcaaagacggcgtggtgaag
cagatgtctggcggtatcgccggtctgttcatggccaacaaagtgacctccatccagggt
accggcaagctgctggctggcaagaaagtggaagttaccgataaagacggcaacgtcacc
gtctacgaagccgagaacgtgatcctggcttccggctctgttccggtgaacattccgccg
gcgccggtagacaacaaaatcatcgtcgactccaccggtgcactggaattcaccgacgta
ccgaagcgcctgggcgtaatcggcgcgggtgtaatcggcctggaactgggctccgtatgg
aaccgtctgggtgccgacgtggttgtgctggaagccctcgacagcttcctggccatcatg
gaccagcagatcgccaaggaatcccagaagatcctgaaaaaacagggtctggatattcgc
ctgtcctgtcgcgtaaccggcagtgaagtaaagggcaaggaagttgtcgttacctaccag
gacaaggaaggtaacgagcatcaggaaactttcgacaagctgatcgtgtgcgtgggccgt
cgcccgttcaccgaaggcctgttgtctgaagacgccggtgtaaaactggacgagcgcggc
ttcatctacgttaacgacctgtgcatgacttctgcaccgggcgtatgggcggtaggtgac
gtggtgcgcggcccgatgctggcgcacaaggcctcagaagaaggcgttgtggttgccgag
cgcatcgctggccagaagccgatgatgaactacgacgtgatcccgaacgtgatctacacc
cacccggaaattgccgcggtaggtcgtaccgaagagcaggttaaagcggacggcgaaccc
tacaatatcggtgttttcccgtttgttgcttccggtcgtgcagtcgccgcgaacgaaact
gcgggtatggtaaaaattatcgcgcatgcagaaaccgatcgcgtactgggcgcccacatt
gttggcccgtctgctgccgatctggtgcagcaggtggcgattgcgatggaattcggttcc
agtgcggaagacatcggcatgaccgtattcggtcacccgaccctgtctgaaaccgtgaag
gaagcggcacttgcggtgaacggccacgcgattcatatcgccaaccgtaaaaagcgcaag
taa
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