KEGG   Microbulbifer pacificus: R5R33_09220
Entry
R5R33_09220       CDS       T09537                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mpaf  Microbulbifer pacificus
Pathway
mpaf03030  DNA replication
mpaf03410  Base excision repair
mpaf03420  Nucleotide excision repair
mpaf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mpaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    R5R33_09220 (polA)
   03410 Base excision repair
    R5R33_09220 (polA)
   03420 Nucleotide excision repair
    R5R33_09220 (polA)
   03440 Homologous recombination
    R5R33_09220 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpaf03032]
    R5R33_09220 (polA)
   03400 DNA repair and recombination proteins [BR:mpaf03400]
    R5R33_09220 (polA)
Enzymes [BR:mpaf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     R5R33_09220 (polA)
DNA replication proteins [BR:mpaf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     R5R33_09220 (polA)
DNA repair and recombination proteins [BR:mpaf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     R5R33_09220 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     R5R33_09220 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 Prok-E2_E HHH
Other DBs
NCBI-ProteinID: WOX03922
UniProt: A0AAU0MTW7
LinkDB
Position
complement(2137734..2140481)
AA seq 915 aa
MSNDKSTTAPLILVDGSSYLYRAFHALPPLATSKGQPTGAVRGVISMLRKHLKEHPDSPV
VVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIQPIHDIIDAMGLPRLVIDGVEADDVI
GTLALQGAEHGMEVIISTGDKDMAQLVRPGVTLVNTMSNTVLDVDGVKEKFGVGPELIID
FLALMGDKVDNIPGVPGVGEKTALALLQNLGSLKDIYANLDAIAPLGFRGSKTLAKKMEE
HKDAADMSYVLATIKTDVDMDYRPEALANGEPDTDKLRELFTELEFRGWVDELGSGSDGG
ESAAEVLAVERNYSVITDEQELDRWLAKLKKAELFAFDTETTSLNYMQAKLVGVSFAVEA
GEAAYLPLAHDYMGAPAQVDFDAALAKLKPILEDAQYKKVGQNLKYDSHILANYAIELRG
IAWDTMLESYVLNSTAGRHDMDSLAQQYLNETTIKFEDIAGKGAKQLTFNQIELEKAGPY
AAEDADITLRLHQELSDRLAKEPSLEKVLEEIEMPLVPVLTRIERNGAYIDAAMLKKQSV
ELEQKMRELEKLAYEEAGEEFNLGSTKQLGTILFEKLQIPVIKKTPKGAPSTAEPVLQEL
ALSHKLPALIMQYRGMAKLKNTYTDKLPLMIDPATGRVHTSYHQAVAATGRLSSSDPNLQ
NIPIRTEEGRRIRQAFVADPTINGGSVIVAADYSQIELRIMAHLSGDKGLLDAFAEGADI
HRATAAEVFEVPVDEVSDEQRRRAKAINFGLIYGMSAFGLAKQLDIPRADAQTYIDRYFA
RYPGVLAYMENTRKQAADKGYVETLFGRRLYLPEINSRNAMQRQAAERTAINAPMQGTAA
DIIKRAMIAVDAWLREEKLKTRLIMQVHDELVLEVPADERERVVKRIPELMQGAAQLDVP
LIADLGEGANWDEAH
NT seq 2748 nt   +upstreamnt  +downstreamnt
atgagtaatgacaaaagcaccaccgcgccgctgatcctggtggacggttcttcctatctc
taccgcgccttccacgccctgccgccgctcgccaccagcaagggccagcccaccggcgcc
gtgcgcggtgtgatttccatgctgcgcaagcacctgaaggagcatccggatagtccggta
gtggtggtgtttgatgccaagggcaagaccttccgcgacgagctgttcgagcactacaag
tcccaccgcccgccgatgcccgacgacctgcgtgcgcagatccagccgatccacgacatc
atcgacgccatgggcctgccgcggttggtcatcgacggtgtagaggcggacgatgtgatc
ggcacccttgctctacagggcgcggagcacgggatggaagtgatcatctccaccggtgac
aaggacatggcccagctggtgcgtcccggggtgaccctggtaaacaccatgtccaacacc
gtgctcgatgtggacggcgtaaaagaaaaatttggcgtgggcccggagctcatcatcgac
ttcctcgcgctgatgggcgacaaggtggacaacatccccggtgtgcccggtgtcggcgaa
aaaaccgcgctggcgctgctgcagaacctgggcagcctgaaagatatctacgcgaacctg
gatgcgatcgcgccgctgggcttccgcggttcaaaaaccctcgcgaaaaaaatggaggag
cacaaggacgcggccgatatgtcctacgtgctcgccaccatcaagaccgatgtggacatg
gactaccgcccggaagcgctggccaatggcgagccggacacggacaagctgcgcgagctg
tttaccgagctggaattccgcggttgggtggacgagctgggcagcgggagcgacggcggc
gagtcggcggcagaagtgctggcggtagagcgcaactacagcgtgatcaccgacgaacag
gagctggatcgctggctggcaaagctgaagaaggccgagctgttcgcgtttgataccgaa
accaccagcctgaattacatgcaggcgaaactggttggggtgagcttcgcggtggaagcg
ggcgaggcggcctacctgccgctcgcgcacgactatatgggcgcgccggcacaggttgat
ttcgacgccgcactggccaagctgaagccgattctggaagatgcgcaatacaaaaaagtc
gggcagaacctcaagtacgacagccatattctggcgaattacgcgatcgagctgcgcggc
attgcctgggacactatgctcgaatcctacgtgctgaacagcaccgccggccgccacgat
atggacagcctggcccagcagtatctcaatgagaccacgatcaagttcgaggacatcgcc
ggcaagggcgccaagcagctcaccttcaaccagatcgaactggaaaaggccggcccctat
gcggcggaagatgcggacatcaccctgcgcctgcaccaggagctgagtgaccgcctggcc
aaagagccgagcctggagaaagtcctcgaggaaatcgagatgccgctggtaccagtgctc
acgcgcatcgagcgcaacggagcctacatcgatgcggccatgctgaaaaaacagtcggtg
gagctggagcagaaaatgcgtgagctggaaaagctggcgtatgaggaagcgggtgaggag
ttcaatctgggctcgaccaagcagctcggcaccatcctgttcgaaaaactgcagatcccg
gtgatcaagaaaaccccgaaaggggcgccctcaaccgcggaaccggtgctgcaggaactg
gcgttgtcccacaagctgccggcgctgatcatgcagtaccgcggcatggccaagctgaaa
aacacctacaccgacaagcttccgctgatgatcgacccggctaccggccgcgtgcacacc
tcctatcaccaggccgtggccgccaccgggcgcctgtcgtcgtcggacccgaacctgcag
aacattcccatccgcaccgaagagggccgccgtatccgccaggcattcgtggccgatcca
acgatcaacggtggcagtgtgattgtggccgcagactattcgcagattgagctgcgtatc
atggcgcacctgtcgggcgacaagggcttgctggatgcgtttgccgagggggccgacatt
caccgtgccaccgcggcggaggtgttcgaagtacctgtggacgaagtcagcgatgagcag
cgccgccgcgccaaggcaatcaactttggtctgatctacggcatgagcgccttcggtctc
gccaagcagctggatatcccgcgcgcggatgcgcagacttacatcgatcgctatttcgcg
cgctaccccggtgtgctcgcgtatatggaaaacacccgcaagcaggcggcagacaaaggt
tatgtcgagaccctgtttggccgccgcctgtacctgccggagatcaactcgcgcaacgcg
atgcagcgtcaggccgccgagcgcaccgctatcaatgcgcccatgcagggcaccgcagcg
gacatcatcaagcgcgcgatgatcgcggtggatgcctggttgcgggaagaaaaactcaag
acccgcttgatcatgcaagtacacgacgaactggtgctggaagtaccggcggacgagcgc
gagcgggtggtgaagcggattccggagttgatgcagggggccgcgcaactggatgtgcct
ctgattgccgatctgggagagggggcgaactgggacgaggcgcactga

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