Microbulbifer pacificus: R5R33_09405
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Entry
R5R33_09405 CDS
T09537
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
mpaf
Microbulbifer pacificus
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpaf03009
]
R5R33_09405 (rsmB)
Enzymes [BR:
mpaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
R5R33_09405 (rsmB)
Ribosome biogenesis [BR:
mpaf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
R5R33_09405 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_25
Methyltr_RsmF_N
MTS
FtsJ
Methyltransf_5
Motif
Other DBs
NCBI-ProteinID:
WOX03956
UniProt:
A0AAU0MVM7
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All DBs
Position
2174947..2176260
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AA seq
437 aa
AA seq
DB search
MNDPRALAARVISRLYQDRGSLQRLLPWAEKQVDEKDRALLRELCYGTARFAPRLELLLG
KLLRKPVKDEELEALILVGLYQLEYTRIPDHAAISATVEAARALKLGHATGVVNGVLRNA
LRDKEALTRKLSGNPQFSSAHPEWLQQAIKNAWGSEAKTIFTANNSNPPMTLRVNLAKTS
RNDYLKQLSDAAIPAQPCTISAAGLVLENPVAVTRLPGFDDGLVSVQDESAQLAAQLLEP
QPGEKILDACAAPGGKTCHLLELQPDLDLTALDVEEERLDRVIENLERLGMSAQLICADA
AESEHWWDGEQYDRILLDAPCSATGVIRRNPDIKLLRRPEDITELAELQGRILRAMWRIL
KPGGTLLYATCSILPEENSAQVARFIAETPDARDNTPQLLNEQPWGLPQEAGMQLLPGIH
AGDGFYYAKLEKLLPEN
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacccgagagcgctggcggcacgtgttatcagccgcctgtatcaggaccgcggc
tcgctgcagcgactgctgccgtgggccgaaaaacaggtcgacgagaaagaccgcgcgctg
ctgcgggaactctgttatggcaccgcccgcttcgccccgcgcctggaattgctgctcggc
aagctgctgcgcaagccggtaaaagatgaagagctggaagcgctcatcctggttggcctg
taccagctggaatacacccgcatcccggatcacgccgccatcagcgccaccgtcgaagcg
gcgcgcgcgctcaagctgggccacgccaccggtgtggtcaacggtgtgctgcgcaatgcg
ctgcgggacaaggaagcacttacccgcaagctctccggcaacccccagttcagctccgcc
caccccgagtggctgcagcaggcaatcaagaatgcctggggcagtgaagccaagaccatc
tttaccgccaataacagcaacccgcccatgaccctgcgggtgaacctggcgaaaaccagc
cgcaacgattacctaaaacaactgagcgacgcggccatccccgcccagccctgcacaatc
tccgcagccggcctggtgctggaaaaccccgtcgccgtcacccgcctgcccggctttgac
gacggcctagtcagcgtccaggacgaatccgcgcaactcgccgcccagttgctggaaccg
cagcccggcgagaaaatcctcgacgcctgcgccgcgcccggcggcaaaacctgccatctg
ctggaactgcagcccgacctagacctcaccgccctcgacgtcgaagaagagcgcctcgat
cgcgtcatcgaaaacctcgagcgcctcggcatgagcgcgcagctcatctgcgcggatgcc
gccgaatccgagcactggtgggacggcgaacagtacgaccgcattctgctggacgccccc
tgctccgccaccggcgtcatccgccgcaacccggatatcaagctgctgcgccggccggaa
gacattaccgaactcgccgaactccagggccgcatcctgcgcgcaatgtggcgcatattg
aaacccggcggcaccctgctctacgccacttgctccatactccctgaggaaaacagcgca
caggtggcgcgcttcattgcggagacaccggatgcgagggacaatacgccgcaattgctg
aacgaacagccctgggggctgccccaggaagcgggaatgcagctgctgccaggcatccat
gccggcgatggtttctattacgccaagctggaaaagttgcttcctgagaactga
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