Microbulbifer pacificus: R5R33_13020
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Entry
R5R33_13020 CDS
T09537
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
mpaf
Microbulbifer pacificus
Pathway
mpaf00220
Arginine biosynthesis
mpaf00240
Pyrimidine metabolism
mpaf00250
Alanine, aspartate and glutamate metabolism
mpaf01100
Metabolic pathways
mpaf01110
Biosynthesis of secondary metabolites
mpaf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
R5R33_13020 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
R5R33_13020 (carB)
00220 Arginine biosynthesis
R5R33_13020 (carB)
Enzymes [BR:
mpaf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
R5R33_13020 (carB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_LDMS
ATP-grasp_5
HTH_23
HTH_3
Phage_CI_repr
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
WOX04655
UniProt:
A0AAU0MY17
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All DBs
Position
3032017..3035247
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AA seq
1076 aa
AA seq
DB search
MPKRTDIQSILIIGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPSM
ADATYIEPVEWKTVAKIIEKERPDAILPTMGGQTALNCALALDKHGVLEKFGCELIGADK
NAIEKAEDRDLFDKAMKAIGLETPRAKIVHTMEEAKKVPEEFGFPVIIRPSFTMGGSGGG
VAYNWPEFEEICKRGLDLSPTNELLIDESLLGWKEYEMEVVRDKNDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQLMRNASIAVLREIGVETGGSNVQFGMDPKTGRMVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIP
RFTFEKFGEADARLTTQMKSVGEVMAIGRNFQESMQKALRGLEVGSFGFEPKLDPAEVGS
MEHLRRELSVAGANRIWYVGDAFRMGMSIDEVYELSGIDPWFLVQIKELMEIEEPLKSIP
TSALDAKTMRYLKRKGFSDKRLADLLGVSQKTVREFRQKLGVFPSYKRVDTCAAEFATGT
AYMYSTYDEECEAEPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRKEKPEGVIVQFGGQTPLNLARYLAAEGVAI
IGTTPEQIDRAEDRERFQQMIIRLGLKQPQNAIVRSEYEAIQRAKEVGYPLVVRPSYVLG
GRAMEIVYKEDELKTYMKEAVQVSEDAPVLLDHFLHSAIEVDIDAVSDGKDVVIGAIMQH
IEQCGVHSGDSACSLPPYSLPADVQDKMREQVKAMARELGVVGLMNTQLAYQDGEIYVIE
VNPRASRTVPFVSKCIGTSLAKIAARCQAGVSLADQGFTKEIVPDYYSVKESVFPFNKFP
KVDPILGPEMKSTGEVMGVGETFAEAFDKSLLGAGDNLPESGKVFISVRDVDKPGVVEVA
REMSKLGFEMVATRGTAKVLQEAGIAVTTVNKMNEGRPHIVDMIKNDEIALVVNTTEGRL
AIRDSADIRRSAENHQVCYTTTLAAAKAMAMAMQIAEPHQVRSLQELHQRVVRLQD
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgcacagacattcaaagcattctgatcatcggcgcaggccccatcgtcatc
ggtcaggcctgtgaattcgattactccggtgcccaggcctgtaaggccctgcgcgaagag
ggtttccgggtaatcctggtgaactccaaccccgccaccatcatgaccgacccgtccatg
gcggacgccacctacatcgagccggtggagtggaagacggttgccaagatcatcgagaaa
gagcgcccggacgcgatcctgcccaccatgggcggccagaccgcgctgaactgtgcgctg
gcgctggacaagcacggcgtgctggaaaagttcggctgtgagctgattggtgcggacaag
aacgccatcgaaaaagcggaagaccgcgatctgttcgacaaggcgatgaaggccatcggc
ctcgagaccccgcgcgccaagatcgtccacaccatggaagaggcgaagaaggttccggag
gagtttggcttcccggtaatcatccgcccgtccttcaccatgggtggttccggtggcggt
gtggcctacaactggccggaattcgaagagatctgcaaacgcggtctcgacctgtccccc
accaacgaactgctgatcgacgaatccctgctcggctggaaagagtacgagatggaggtg
gtgcgcgacaaaaacgacaactgcatcatcgtgtgttccatcgagaacttcgacccgatg
ggcgtgcacaccggtgactccatcaccgtggccccggcgcagaccctgaccgacaaggaa
taccagctgatgcgcaacgcgtccatcgcggtattgcgcgagatcggcgtggaaaccggc
ggctccaacgtgcagttcggtatggacccgaaaaccggccgcatggtggtaatcgagatg
aacccgcgggtgtcccgctcctccgcgctggcctccaaggccaccggcttcccgatcgcc
aaggtcgcggccaagctggcggtgggctacaccctggacgaactgcagaacgacatcacc
ggcggcgccaccccggcgtctttcgagccgtccatcgactacgtcgtgaccaagattccg
cgcttcaccttcgagaaattcggtgaagcggatgcgcgcctgaccacacagatgaaatcc
gtgggtgaagtcatggccatcggccgcaacttccaggaatccatgcagaaagccctgcgc
ggcctggaagtgggctccttcggtttcgagccgaagctggacccggcggaagtgggctcc
atggagcacctgcgccgcgaactgtccgtggccggcgccaaccgcatctggtatgtgggc
gacgccttccgtatgggcatgagcatcgacgaagtgtacgagctgtccggcatcgatccc
tggttcctggtgcagatcaaggagctgatggaaatcgaggaaccgctgaagtccatcccg
acttccgcgctcgacgccaagaccatgcgctacctgaagcgcaagggcttctccgacaag
cgcctcgcggacctgctgggcgtgagccagaagaccgtgcgcgagttccggcagaagctg
ggtgtgttcccgtcctacaagcgcgtggatacttgcgccgcggaattcgccaccggcacc
gcctacatgtactccacctatgacgaggagtgtgaagcggagccgaccgacaagaagaaa
atcatggtgctcggcggcggtcccaaccgtatcggccagggcatcgagttcgactactgc
tgtgtgcacgcggcactcgccatgcgcgaagacggttacgagaccatcatggtcaactgt
aacccggagaccgtatccaccgactacgacacttccgaccgcctctacttcgagccggta
accctggaagacgtactggagatcgtgcgcaaggaaaaaccggaaggtgtgatcgtgcag
ttcggcggccagaccccgctgaacctggcgcgctacctggccgccgagggcgtggcgatc
atcggtaccaccccggagcagatcgaccgcgcggaagaccgtgagcgcttccagcagatg
atcatccgtctcggcctcaagcagccgcagaacgccatcgtgcgttcagagtacgaagcc
atccagcgcgcgaaggaagtgggctacccgctggtggtgcgtccttcctacgtactgggc
ggccgcgccatggagatcgtgtacaaggaagacgagctcaagacctacatgaaggaagcc
gtacaggtttccgaggatgcgccggtactgctggaccacttcctgcactccgccatcgag
gtggatatcgacgcggtatccgacggcaaggacgtggtgatcggcgcgatcatgcagcac
atcgaacagtgcggcgtgcactccggtgactccgcctgctcgctgccgccctacagcctg
ccggccgacgtgcaggacaagatgcgcgagcaggtgaaagccatggcgcgcgaactgggc
gtggttggcctgatgaacacccagctggcgtaccaggacggcgagatctacgtgatcgag
gtgaacccgcgcgcgtcccgtaccgtgcccttcgtgtccaagtgcatcggcacctcgctg
gcgaagatcgccgcgcgctgtcaggccggtgtgagcctggcggatcagggcttcaccaag
gaaatcgtgccggattactactccgtcaaggagtcggtattcccgttcaacaagttcccg
aaagtggacccgatcctcggcccggaaatgaaatccaccggtgaggtgatgggcgtgggc
gagaccttcgccgaagccttcgacaagtccctgctgggcgccggcgacaatctgccggaa
tccggcaaggtgttcatctccgtgcgcgatgtggacaagcccggtgtggtggaagtggcc
cgcgagatgtccaagctgggcttcgagatggtcgctacccgcggtaccgccaaggtcttg
caagaagcgggcattgcggttacaacggtgaacaagatgaacgaaggccggccgcatatc
gtcgacatgattaaaaacgacgagattgcactggtggtcaacaccaccgagggtcgcctg
gccattcgcgattccgcggatatccgccgcagcgcggaaaaccatcaggtttgctacacc
accaccctggcggcggcaaaagccatggccatggccatgcagattgccgaaccgcaccag
gtgcgcagcctgcaggaactgcaccagcgcgtcgtgcgcctgcaagactga
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