Microbulbifer pacificus: R5R33_13660
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Entry
R5R33_13660 CDS
T09537
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mpaf
Microbulbifer pacificus
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpaf03016
]
R5R33_13660 (truB)
Enzymes [BR:
mpaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
R5R33_13660 (truB)
Transfer RNA biogenesis [BR:
mpaf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R5R33_13660 (truB)
Prokaryotic type
R5R33_13660 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
WOX04778
UniProt:
A0AAU0MW97
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All DBs
Position
3196929..3197879
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AA seq
316 aa
AA seq
DB search
MGRRPKWGRQVDGVLLLNKPAGISANDALQKAKRLFFANRAGHTGALDPLATGVLPICFG
EATKFSQYLLDADKRYRSTFCFGMTTETGDADGNVVSTTDASGITEAQVRKAMEAFRGTI
SQVPSMYSALKYNGQPLYKLARQGIEVEREPRKVEIYSYELLTFIPAADSPDKLPRAEVE
VHCSKGTYVRSLAEDLGKALGVGAFVEKLHRSAAGPYHEDDAVTLEELAEERGEDRAELL
DHHLLPADSPASALPKMILTDDSGYYLRQGQPVMDLQVYRLGDEGDMVRLFLESGEFLGV
GEITDDGRVAPRRLVK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcagaccaaaatggggccggcaggtcgacggcgtgctgttgctgaacaagccc
gccgggatctctgccaacgatgccctgcagaaagccaaacgtctcttcttcgccaaccgc
gccggccacaccggtgcgctggatccgctggcgaccggcgtgctgccgatttgcttcggc
gaggcgaccaagttctcccagtacctgctggatgcggacaagcgctaccgcagcaccttc
tgtttcggtatgaccaccgagacaggcgacgccgatggcaatgtggtttccaccacggat
gcctcaggaattaccgaggcccaggtgcgcaaggcgatggaggccttccgcggcaccatc
agccaggtgccgtcgatgtactcggcgctcaagtacaacggtcagccgctgtacaaactg
gcgcgccagggcattgaagtggagcgggaacctcggaaagtggaaatttattcctacgag
ctgctgacgttcatccccgcggcggactctcccgacaagctgccccgggcggaagtagag
gtgcactgttccaagggcacttatgtgcgcagcctcgccgaggatctgggcaaggcgctg
ggcgttggtgcgttcgtggagaagctccaccgcagtgccgccggtccctaccacgaggac
gatgcggtcacgctggaagagctggcagaagagcggggggaagatcgcgcagaattgctc
gatcaccacctgttaccggcggattctcccgcctccgcgctgcccaaaatgatccttaca
gacgactcgggctactatctgcgtcaggggcagccggtgatggatctgcaggtctatcgt
ttgggcgatgaaggtgatatggtgcgcctcttcctggaaagtggtgaatttctgggcgtt
ggagaaattactgatgacgggcgggtcgccccccgccggttggtgaaataa
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