Microbulbifer pacificus: R5R33_13670
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Entry
R5R33_13670 CDS
T09537
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mpaf
Microbulbifer pacificus
Pathway
mpaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R5R33_13670 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpaf03019
]
R5R33_13670 (pnp)
03016 Transfer RNA biogenesis [BR:
mpaf03016
]
R5R33_13670 (pnp)
Enzymes [BR:
mpaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
R5R33_13670 (pnp)
Messenger RNA biogenesis [BR:
mpaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
R5R33_13670 (pnp)
Transfer RNA biogenesis [BR:
mpaf03016
]
Prokaryotic type
tRNA degradation factors
R5R33_13670 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
WOX04780
UniProt:
A0AAU0MW40
LinkDB
All DBs
Position
3198533..3200641
Genome browser
AA seq
702 aa
AA seq
DB search
MNPVTKTFQYGKDQVTIETGRVARQATGAALVTVGETVVLCTVVGAKDAKAGQDFFPLSV
HYQEKAYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPKGFMNEVQVMCTVLSAE
KDVDPDIAAMIGTSAALAISGIPFSGPIGAARVGYTEKDGYILNPGYKALKESELDMVVA
GTKDAVLMVESEAAELPEDIMLGAVLFAHQEMQAVVKVCEELKAEAGKPTWDWQPEAANE
ELKSALEGQFGEQVKEAYRITDKQQRTTRLGELRNAAAAALATEEVDEATVKTYFGKLEK
KIVRGAVVRGEPRIDGRDTKTVRPISVEVGVLPKGHGSALFTRGETQALVVATLGATRDA
QIIDALEGERKDYFMLHYNFPPYSVGEAGRVGATGRREIGHGRLARRGIAAVLPNPESFP
YTLRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLVKEEDGFAVLTDIL
GDEDHLGDMDFKVAGTASGVTALQMDIKIEGITEEIMETALEQALHARLHILAEMNKVIG
ASREVVNENAPRYATLKIHPDKIRDVIGKGGATIRSITEETGASIDIEDDGTVKVFGEDG
VSLEAAVTRIEEITAEAEIGAIYEGKVVRIVDFGAFVNFLPGKDGLVHISQIAEERVNAV
TDYLSEGQLVKVKVLDVDQRGRIKLSIKEATADQADEATGEE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccagtaaccaaaacattccagtacggaaaagaccaggtcaccatcgaaaccggc
cgcgtcgcgcgccaggctaccggtgcggcgctcgtcactgtgggcgaaaccgttgttctg
tgtaccgttgtcggtgccaaagacgccaaagccggccaggattttttcccactgtctgtg
cattaccaggaaaaggcctacgcggctggcaaaattcccggtggcttcttcaagcgtgaa
ggccgcccgtctgaaaaagaaaccctgacttcccgtctgatcgaccgtccgatccgtccg
ctgttcccgaaaggtttcatgaacgaagtacaggttatgtgtaccgttctgtctgcggaa
aaggacgttgatccggatatcgccgccatgatcggtacctccgcggcactcgccatttcc
ggtattccgttcagtggcccgatcggcgcggcgcgcgtgggttacaccgaaaaagacggc
tacatcctgaacccgggatataaagcactgaaagagtccgagctggacatggtggtcgca
ggtaccaaagacgccgtactgatggtggaatccgaagccgccgagctgccggaagacatc
atgctgggtgcggttctgtttgcgcaccaggaaatgcaggcggtggttaaagtctgtgaa
gaactgaaagccgaagctggcaagcccacctgggactggcagcccgaagccgccaacgaa
gaactgaagtccgcactggaaggccagttcggcgagcaggtgaaggaagcgtaccgcatc
accgacaagcagcagcgcaccacccgtctgggcgaactgcgcaatgccgctgcggctgca
ctggccaccgaagaagtggacgaagctaccgtaaaaacctacttcggcaagctggagaag
aaaatcgtacgcggtgctgtggtgcgcggtgagccccgtatcgacggtcgcgacaccaaa
accgtgcgcccgatcagcgtggaagtgggcgtgctgccgaaaggccatggctctgcgctg
ttcacccgcggtgaaacccaggcgctggttgttgccaccctcggtgccacccgcgatgcg
cagatcatcgacgccctggaaggcgagcgcaaagactacttcatgctgcactacaacttc
cctccctactctgtaggtgaagcgggacgtgtaggcgcaaccggtcgccgcgaaatcggc
cacggccgtctggcccgtcgcggtatcgccgctgtgctgccgaacccggagagcttcccc
tacaccctgcgtgtagtttccgagatcaccgaatccaacggttccagctccatggcttcc
gtgtgtggttccagcctggcgctgatggatgcgggcgtaccgctgaaagcaccggttgcc
ggtatcgccatgggtctggtgaaggaagaagacggttttgcggttctgaccgacatcctg
ggtgacgaagaccacctgggcgacatggacttcaaggtagccggtaccgcttctggtgtg
actgcgctgcagatggacatcaaaatcgaaggtatcaccgaagagatcatggagactgct
ctcgagcaggcactgcatgcccgcctgcacatcctggcggaaatgaacaaggtgatcggc
gcttcccgcgaagtggtgaacgagaatgctccgcgctacgcgaccctgaagatccatccg
gacaagatccgcgacgtgattggtaaaggcggcgcgaccatccgctccatcaccgaagaa
accggtgcttccatcgatatcgaagacgacggtaccgtaaaagtctttggtgaagacggt
gtaagcctggaagcggcggttacccgcatcgaggaaatcaccgcggaagccgagatcggc
gcaatttacgaaggtaaggttgtgcgcatcgtcgacttcggtgcgttcgtgaacttcctg
ccgggtaaagacggtctggtacacatctcccagatcgccgaagagcgcgtcaatgcggtt
accgactacctgagcgaaggccagctggtcaaggtcaaggtgctggacgtagaccagcgc
ggccgtatcaagctgtccatcaaggaagcgactgccgatcaggcggacgaggccactggc
gaagagtaa
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