Microbulbifer pacificus: R5R33_13750
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Entry
R5R33_13750 CDS
T09537
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mpaf
Microbulbifer pacificus
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpaf03016
]
R5R33_13750 (rnd)
Enzymes [BR:
mpaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
R5R33_13750 (rnd)
Transfer RNA biogenesis [BR:
mpaf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
R5R33_13750 (rnd)
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Paralog
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DNA_pol_A_exoN
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
WOX04796
UniProt:
A0AAU0MXQ5
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All DBs
Position
3225796..3226935
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AA seq
379 aa
AA seq
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MSEQTKKQLVDTTPIWVDSAEQLAELCARWRTQSAVALDTEFMRSRTFYPLPALVQVGDG
KQCYLIDNLAIDNLEPLKELLLDTRVVKIMHSCSEDLETLDRLLGAVPEPIFDTQVAAAI
TGMGAGLGYAATVQQLLQIELPKSETRSDWLQRPLSDSQKNYAALDVAWLPLIYGMLLKT
LREQERLEWLREDCDAIIQSARQTEAPELYYLKVKGAWRLRQKQLAVLQDLCAWREREAR
ARDMPRNHLLKENVCFGLAQSMPKHLATLGQPGLEGKTIRKYGEILLQIIASASERLDLP
PRMPMPLNREQGEELKLLRQKVAELAEQAGMPPEILVRKKELENLVQAAAPELEGRLLGW
RRAVVGEPLLEELNRLRKA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcaaacgaaaaagcaactggtcgacaccacgcccatctgggtcgacagcgcc
gagcagctggcggagctctgcgcccgctggcgaacccagagtgcggtggcgctggatacc
gaattcatgcgcagccgaaccttctatccgctgcctgcgctggtacaggtgggcgatggt
aagcagtgctatctgatcgacaatctcgccatcgacaacctggagccgctgaaggagctg
ctgctggatacccgcgtggtgaagatcatgcactcctgcagcgaggatctggaaaccctg
gatcgcctgctcggcgcggtaccggagccgattttcgatacccaggtggccgccgccata
accggtatgggcgcgggccttgggtacgccgctacggtacagcagctgttgcagattgag
ttgcccaaaagcgagacccgttccgattggctgcagcgtcccctgagtgactcgcagaaa
aattatgccgcactcgatgtggcgtggctgccgctgatttacggcatgctgctgaaaaca
ctgcgtgaacaggagcgcttggaatggctgcgggaagattgcgatgcaatcatccagtcc
gcgcggcaaaccgaagcgccggagctttactatctcaaggtgaagggggcctggcgtctg
cggcagaaacagctggcggtgttgcaggacctgtgcgcctggcgcgagcgcgaagcgcgc
gcgcgggatatgccgcgcaatcacctgctgaaagaaaatgtctgtttcggcctcgcccag
tccatgcccaagcacctcgccaccctggggcagcccgggctcgagggcaaaaccatacgc
aaatacggcgagattttgttgcagatcatcgccagcgccagcgagcgcctggatctgccg
ccgcgcatgcccatgccgctgaaccgcgagcagggcgaggagctgaaactcctgcggcag
aaagtcgcggagctcgccgaacaagctggaatgccgccggaaatcctggtgcgcaaaaaa
gaattggaaaacctggtgcaggccgcagccccggagctggaaggccgcctgctgggctgg
cgccgcgccgttgtcggcgagccgctgcttgaagaactgaatcgattgagaaaagcctga
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