KEGG   Microbulbifer pacificus: R5R33_13750
Entry
R5R33_13750       CDS       T09537                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mpaf  Microbulbifer pacificus
Brite
KEGG Orthology (KO) [BR:mpaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mpaf03016]
    R5R33_13750 (rnd)
Enzymes [BR:mpaf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     R5R33_13750 (rnd)
Transfer RNA biogenesis [BR:mpaf03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    R5R33_13750 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC DNA_pol_A_exoN RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: WOX04796
UniProt: A0AAU0MXQ5
LinkDB
Position
3225796..3226935
AA seq 379 aa
MSEQTKKQLVDTTPIWVDSAEQLAELCARWRTQSAVALDTEFMRSRTFYPLPALVQVGDG
KQCYLIDNLAIDNLEPLKELLLDTRVVKIMHSCSEDLETLDRLLGAVPEPIFDTQVAAAI
TGMGAGLGYAATVQQLLQIELPKSETRSDWLQRPLSDSQKNYAALDVAWLPLIYGMLLKT
LREQERLEWLREDCDAIIQSARQTEAPELYYLKVKGAWRLRQKQLAVLQDLCAWREREAR
ARDMPRNHLLKENVCFGLAQSMPKHLATLGQPGLEGKTIRKYGEILLQIIASASERLDLP
PRMPMPLNREQGEELKLLRQKVAELAEQAGMPPEILVRKKELENLVQAAAPELEGRLLGW
RRAVVGEPLLEELNRLRKA
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgtctgagcaaacgaaaaagcaactggtcgacaccacgcccatctgggtcgacagcgcc
gagcagctggcggagctctgcgcccgctggcgaacccagagtgcggtggcgctggatacc
gaattcatgcgcagccgaaccttctatccgctgcctgcgctggtacaggtgggcgatggt
aagcagtgctatctgatcgacaatctcgccatcgacaacctggagccgctgaaggagctg
ctgctggatacccgcgtggtgaagatcatgcactcctgcagcgaggatctggaaaccctg
gatcgcctgctcggcgcggtaccggagccgattttcgatacccaggtggccgccgccata
accggtatgggcgcgggccttgggtacgccgctacggtacagcagctgttgcagattgag
ttgcccaaaagcgagacccgttccgattggctgcagcgtcccctgagtgactcgcagaaa
aattatgccgcactcgatgtggcgtggctgccgctgatttacggcatgctgctgaaaaca
ctgcgtgaacaggagcgcttggaatggctgcgggaagattgcgatgcaatcatccagtcc
gcgcggcaaaccgaagcgccggagctttactatctcaaggtgaagggggcctggcgtctg
cggcagaaacagctggcggtgttgcaggacctgtgcgcctggcgcgagcgcgaagcgcgc
gcgcgggatatgccgcgcaatcacctgctgaaagaaaatgtctgtttcggcctcgcccag
tccatgcccaagcacctcgccaccctggggcagcccgggctcgagggcaaaaccatacgc
aaatacggcgagattttgttgcagatcatcgccagcgccagcgagcgcctggatctgccg
ccgcgcatgcccatgccgctgaaccgcgagcagggcgaggagctgaaactcctgcggcag
aaagtcgcggagctcgccgaacaagctggaatgccgccggaaatcctggtgcgcaaaaaa
gaattggaaaacctggtgcaggccgcagccccggagctggaaggccgcctgctgggctgg
cgccgcgccgttgtcggcgagccgctgcttgaagaactgaatcgattgagaaaagcctga

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