Microbulbifer pacificus: R5R33_13895
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Entry
R5R33_13895 CDS
T09537
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mpaf
Microbulbifer pacificus
Pathway
mpaf00521
Streptomycin biosynthesis
mpaf00523
Polyketide sugar unit biosynthesis
mpaf00541
Biosynthesis of various nucleotide sugars
mpaf01100
Metabolic pathways
mpaf01110
Biosynthesis of secondary metabolites
mpaf01250
Biosynthesis of nucleotide sugars
Module
mpaf_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
R5R33_13895 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
R5R33_13895 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
R5R33_13895 (rfbC)
Enzymes [BR:
mpaf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
R5R33_13895 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Ppnp
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
WOX04824
UniProt:
A0AAU0MWG6
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All DBs
Position
3257453..3258001
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AA seq
182 aa
AA seq
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MKVIKTSIPDVKIIEPKVFGDERGFFLETFRQEFFNRECAEHTFVQDNHSKSSQGILRGL
HYQTERTQGKLVRVTSGEVFDVAVDLRKSSATFGQWVGVFLSAENKRQLWVPEGFAHGFY
VTSESAEFLYKCTDYYAPEYEHSLRWDDPEIGIEWPLVNGESPKLSSKDAEGKLLKDAAV
FG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaataaaaaccagtattcccgatgtaaaaattatcgagcccaaagtttttggt
gacgaacgcggcttcttcctggaaaccttccgtcaggagtttttcaatcgggaatgtgcc
gagcacacctttgtgcaagataaccacagcaaatcgagccagggaattctccgcggcctg
cattaccaaaccgagagaactcagggcaaactggtgcgggtcacctccggggaagtattc
gacgtagcggtagacctgcgcaagagctccgccactttcggccaatgggtgggggtattc
ctgagcgcggaaaacaaacgccaactctgggtacccgagggctttgcccacggtttctac
gtcaccagcgaatccgccgagttcctgtacaaatgcaccgattactacgctcccgaatac
gaacactcgctgcgctgggacgaccccgaaatcggcatcgaatggcccctggtcaatggc
gaatcgccaaagctatccagtaaagatgccgaaggaaagcttctgaaagacgccgcagtg
ttcggctga
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