Microbulbifer pacificus: R5R33_14435
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Entry
R5R33_14435 CDS
T09537
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
mpaf
Microbulbifer pacificus
Pathway
mpaf00550
Peptidoglycan biosynthesis
mpaf01100
Metabolic pathways
mpaf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R5R33_14435 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R5R33_14435 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mpaf01011
]
R5R33_14435 (mrdA)
Enzymes [BR:
mpaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
R5R33_14435 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
mpaf01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
R5R33_14435 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WOX04925
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All DBs
Position
3391917..3393833
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AA seq
638 aa
AA seq
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MSENLRFKDHHTEQRLFRNRMLVAIIGVAALLGVLVARLYNLQIVNYENYRTQSDENRIQ
VRPVPPTRGLIYDRNGVLLADNRASYTLAIVRERIKDLDATLELLGNLVQMDDDDVEKFK
RRLQRRRPFEPVPLRYRLTEEEIARISVNEFRLPGVSVEAELVRYYPETELFAHSVGYVG
RIAERDLSAFSEEDVRRYRGTQSIGKVGLERSYEDLLLGEVGFENVETNARGRVLRVLER
HDPKPGAELTLHLDTRLQQVATDALGEHRGAVVAIDVKTGGVLAFVSKPSYDPNLFVTGI
SFKDYSELRDSLDVPLFNRVVQGQYPPGSTLKPMMGLGGLAAGVITANTRVADPGFFRLP
NDSRIYRDWKRWGHGKSIDLIEGLAQSCDVYFWDMASRWNIDGMHDIATRFGLGDKTGID
LPREYPGIFPSREWKRGARGAAWYPGDSLNAVLGQGFVLATPLQLAVMTATIANRGTHYR
PQMVMAIDGVEQPPEVLHHVEARPEHWDLVFKGMEQVVKAGTGKNAGAGLDFRVAGKSGT
AQVVGIAQGAKYDSEALKERHRDHALFIAFAPVDDPQIAVSVLVENGEGGGRVAAPVARE
VLADWMQRPFEDTAGLSSWRPPMAPLTSTPFEEVRVRG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaacctgcgcttcaaagaccatcacaccgagcagcgactgtttcgcaaccgt
atgctggtggccatcatcggcgtggcggcgctgctcggcgtactggtggcgcggctgtac
aacctgcagatcgtcaattacgaaaactatcgcacccagtcggacgaaaaccgcatccag
gtgcgaccggtgccccccacccgcggcctgatctacgaccgcaacggcgtattgctggcg
gataaccgcgccagctacacccttgccatcgtgcgcgagcgcatcaaggatctggacgcc
accctggaactgctcggcaatctggtgcagatggacgatgacgacgtggaaaaattcaaa
cgtcgcctgcagcgccgccgcccgttcgagccggtgcccctgcgctatcgcctaaccgaa
gaggaaatcgcccgcatcagcgtcaatgaattccgcctccccggggtgtccgtggaagca
gaactggtgcgctattacccggaaacagaactgttcgcccacagcgtcggctatgtgggg
cgcatcgccgagcgggatctctccgcgttttccgaagaggacgtgcgtcgctaccgcggc
acccagagcatcggcaaggtggggctggagcgctcctacgaggacctgctgctcggggaa
gtgggcttcgaaaacgtggaaaccaacgcccgcggtcgcgtgctgcgggtgctggagcgc
catgatcctaagcccggcgccgagctgaccctgcacctggatacccgcctgcagcaggtg
gccaccgatgccctcggcgaacaccgcggcgccgtggtggccatcgatgtgaagaccggc
ggcgtgctggcgtttgtgagcaagccgtcttacgaccccaacctgtttgtcaccggcatc
agcttcaaggattacagcgaactgcgggactcgctcgacgtaccgctgttcaaccgcgtg
gtgcagggccagtacccgcccggctccaccttgaagccgatgatgggcctcggtggcctg
gccgccggggtgatcaccgccaatacccgtgttgcggatcccggtttcttccgcctgccc
aacgattcccgcatctaccgcgactggaagcgctggggccacggcaagagcatcgacttg
atcgaggggctggcgcagagctgcgacgtgtatttctgggatatggcttcgcgctggaat
atcgatggcatgcacgacatcgccacccgcttcggtctcggcgacaagaccggtatcgac
ctgccgcgggagtatccggggattttcccgtcgcgggagtggaagcgcggtgcacgcggc
gcggcctggtacccgggtgacagtctgaacgcggttctggggcagggcttcgtgctggcc
acgccgctgcaactggcggtgatgaccgccaccatcgccaatcgcggcacccactaccgc
ccgcagatggtgatggccatcgacggtgtggaacagccgccggaagtactgcaccacgtg
gaggcgcgcccggaacactgggatctggtgttcaaaggcatggagcaggtggtcaaggcc
ggtaccggtaaaaatgccggcgccgggctggatttccgggtggccggcaagtccggcacc
gcgcaggtggtgggtattgcccagggggcaaaatacgactcggaggcactcaaggagcgc
caccgggaccacgccctgttcatcgcctttgcaccggtggacgacccacagatcgcggtg
tcggtgctggtggagaacggcgagggcggtggccgggttgcggcgccggtggcacgggaa
gtactggccgactggatgcagcggccgtttgaagataccgccggcctgtcgtcctggcgg
ccgccgatggcgccgctgacatcaacaccgtttgaggaggttcgcgtccgtggctag
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