Microbulbifer pacificus: R5R33_14770
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Entry
R5R33_14770 CDS
T09537
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mpaf
Microbulbifer pacificus
Pathway
mpaf03030
DNA replication
mpaf03430
Mismatch repair
mpaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R5R33_14770 (holA)
03430 Mismatch repair
R5R33_14770 (holA)
03440 Homologous recombination
R5R33_14770 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpaf03032
]
R5R33_14770 (holA)
03400 DNA repair and recombination proteins [BR:
mpaf03400
]
R5R33_14770 (holA)
Enzymes [BR:
mpaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R5R33_14770 (holA)
DNA replication proteins [BR:
mpaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R5R33_14770 (holA)
DNA repair and recombination proteins [BR:
mpaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R5R33_14770 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WOX04991
UniProt:
A0AAU0MYA1
LinkDB
All DBs
Position
complement(3466000..3467004)
Genome browser
AA seq
334 aa
AA seq
DB search
MARITPRQLSQNLRQGIAPIYVVTGDEPLLVQECCDSIRDAARKHGFFERDLLHGEHNFD
WGQLLSAAGSLSLFADKKIIELRLPGGKPGDKGSKALQEFASMGADDTLLLLVLPRLDRA
QLNSKWVKALEERGVLIQIWPVDATEMPRWIHERLRAAGLEAEPEAIQILAERVEGNLLA
ASQEIEKLKLLAQDSIITADIMNNAVASSARYDVFGLIDKALAADAAGAVRTLQGLRAEG
VEAAVVLWAIAREIRTLLETQQKLDQGQPINRLVRIQKRQPLIQAACQRLRPRQLENFLL
RARAVDNAIKGGKEMDPWAGLLELTLNLSGKRSI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcataacccccaggcaactaagccaaaacctgcgccagggcatagcccccatt
tacgtcgtcaccggcgacgaaccgctactggtacaggagtgctgcgacagcatccgcgac
gccgcgcgcaaacacggcttctttgaacgcgacctgctgcacggcgaacacaacttcgac
tggggacaactgctctccgccgccggcagcctctccctgttcgccgataaaaaaatcatc
gaactgcgcctgcccggcggcaagcccggcgacaagggcagcaaagcgctgcaggaattc
gccagcatgggggccgacgacaccctgctgttactggtgctaccacgactcgaccgcgcc
cagctcaacagcaagtgggtcaaggcactggaagaacgcggcgtactcatccagatctgg
cccgtggacgccacggaaatgccgcgctggatacatgagcgcctgcgcgccgccggcctc
gaagccgagccggaagccatccagattctcgccgagcgcgtcgagggcaacctgctcgcc
gccagccaggaaattgaaaagctgaaactgctggcacaggacagcatcatcaccgccgat
atcatgaacaacgccgtcgccagctctgcccgctacgacgtattcggcctgatcgacaag
gcgctggccgccgatgcggccggcgccgtgcgcacactccagggcctgcgcgcggaaggt
gtggaagccgctgtggtgctgtgggccatagcgcgggaaatccgcaccttgctggaaacc
cagcagaagctggatcagggccagccgatcaaccgcctggtgcgtatccagaagcgccag
ccgttgatccaggctgcgtgccaacgcctgcgcccacgccagctggaaaacttcctgctg
cgcgcccgcgcggtggacaacgccatcaagggcggcaaggaaatggacccctgggcagga
ctgctggagctgaccctgaatctctccggcaagcgcagtatttag
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