Microbulbifer pacificus: R5R33_16575
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Entry
R5R33_16575 CDS
T09537
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
mpaf
Microbulbifer pacificus
Pathway
mpaf00061
Fatty acid biosynthesis
mpaf00071
Fatty acid degradation
mpaf01100
Metabolic pathways
mpaf01212
Fatty acid metabolism
mpaf02024
Quorum sensing
Module
mpaf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
R5R33_16575
00071 Fatty acid degradation
R5R33_16575
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
R5R33_16575
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mpaf01004
]
R5R33_16575
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpaf04147
]
R5R33_16575
Enzymes [BR:
mpaf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
R5R33_16575
Lipid biosynthesis proteins [BR:
mpaf01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
R5R33_16575
Exosome [BR:
mpaf04147
]
Exosomal proteins
Exosomal proteins of breast milk
R5R33_16575
Exosomal proteins of breast cancer cells
R5R33_16575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WOX05337
LinkDB
All DBs
Position
3915479..3917116
Genome browser
AA seq
545 aa
AA seq
DB search
MDIERSILDVLTSATAKYAERPAFTCLGHTLTHGDIDRLSANFASYLQNNTNLKPGDRIA
VQLPNVLQYPVVVFGALRAGLIVVNTNPLYTRRELKHQLNDSGAKALVVLANIADTASAV
IPETSVEQVIVSEIADLHAPLKRVLINSVAKYVKKMVPAFHFANQVDFRDAMAIGARQPH
QDVARSPDDIAVLQYTGGTTGVAKGAMLTNRNLVANMEQVREALGDSMKEGEEFYIAPLP
LYHIYAFTIHCMCLFTTGNHSLLIPNPRDIPGFVKTLKGKRFTGFCGLNTLFNGLMRCPD
FADLDFSKLHTTCSGGMALTRATAEKWEEVTGCVVTEGYGMTETSPVVSFNPAEAVQLGT
VGVAVPGTEVKVTDENGNDLPNNTPGELCVRGPQVMKGYWERPEATAETIDAEGWLKTGD
MAVIQDDGYIKIVDRKKDMIIVSGFNVYPNEIEDIVAAHPKVTEAAAVGIPDERSGESVK
LFVVRADTSLTAEEVIAYCRENMTAYKVPKNIEFREDLPKTNVGKILRRELRDEELKKVE
AEVSA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
ttggacatcgaacgcagtattcttgacgtgctcaccagtgccacggccaaatatgctgag
cggcccgcgtttacctgcttgggtcacacgcttacccatggcgacatcgaccggctcagt
gccaactttgcctcctacctgcagaacaataccaacctcaagcccggtgaccgtatcgcc
gtacaactgcccaacgtattgcaatacccggttgttgtattcggtgcactgcgcgctggc
ctcatcgtggtcaacaccaacccgctgtacacccgtcgcgaactcaagcaccagctgaac
gactccggtgccaaagcgttggtcgtactggcgaacattgccgacaccgcgtccgcggtg
attccggagacttcggtagagcaggtcattgtttccgaaattgccgacctgcatgcaccg
ctcaagcgcgtgctgatcaacagtgtggcgaagtacgtcaagaaaatggtgccggcattc
cattttgccaaccaggtagattttcgcgatgccatggcaattggtgccaggcagccacat
caggacgttgcgcgctcaccggatgatatcgccgtgctgcaatataccggtggtacgacc
ggtgttgccaagggtgcgatgcttaccaatcgcaacctggttgcaaacatggaacaggtg
cgcgaagcactgggtgattccatgaaagagggtgaggagttttacattgcgccgctgccc
ctgtaccacatttacgcctttaccattcactgtatgtgcctgtttaccaccggcaatcac
tcgctgctgatcccgaatccgcgggatatcccgggttttgtcaaaactctcaagggcaag
cgttttaccggcttctgtggtctgaataccctgtttaacggcctgatgcgctgcccggat
ttcgcggatctggatttcagcaagctgcacaccacctgctccggcggtatggcgctgacg
cgcgccaccgcagagaaatgggaggaagtgaccggttgcgtggtgaccgagggttacggc
atgaccgagacctcgccagtagtttccttcaacccggcggaagccgtgcaactgggtact
gtgggtgtcgcagtgccgggcactgaagtgaaggtcaccgacgagaacggtaatgacctg
cccaacaacactcccggagagctgtgtgtgcgcggccctcaggtgatgaagggttactgg
gagcgcccggaagccaccgcggaaaccatcgatgcggaaggctggctgaaaaccggtgat
atggcagtcatccaggatgacggttacatcaagatcgttgaccgcaagaaggacatgata
attgtgtccggtttcaacgtgtatccgaatgaaatcgaagatatcgttgccgctcacccg
aaagtgaccgaagctgccgccgtgggtattcccgatgagcgcagcggcgaatcggtcaaa
ttgtttgtggtgagagcggatacgtcgcttacggcggaagaggtgattgcctactgccgc
gagaacatgaccgcgtataaagtgccgaaaaatatcgagttccgtgaagacctgccgaaa
accaatgttggcaagattttgcgtcgcgagcttcgcgatgaagaactgaaaaaagtcgaa
gctgaggtcagtgcctga
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