Microbulbifer pacificus: R5R33_17670
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Entry
R5R33_17670 CDS
T09537
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
mpaf
Microbulbifer pacificus
Pathway
mpaf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
R5R33_17670 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpaf02000
]
R5R33_17670 (msbA)
Enzymes [BR:
mpaf01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
R5R33_17670 (msbA)
Transporters [BR:
mpaf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
R5R33_17670 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_21
AAA_29
AAA_25
AAA_22
ABC_membrane_2
DEAD
RsgA_GTPase
AAA_30
DUF815
AAA_28
AAA_5
MMR_HSR1
DUF87
NACHT
AAA_33
Motif
Other DBs
NCBI-ProteinID:
WOX05545
UniProt:
A0AAU0MY56
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All DBs
Position
4174863..4176734
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AA seq
623 aa
AA seq
DB search
MAIRGGHAAKSYMEKSSQPVLKPEHGAQTYRRLLSYAIPQWPLFVIAVFGFMLFSSMEVL
LIAVTELLLDAVGVGIEQGRGFLSQFVAKFFAGGVMPQETARWLVPLVMLVIIGLRAVGN
FVGSYGLAYVARAVIHQLRTELFEHIGQLPSAYFDRYTGAYLISKVAYNVEQVTNSITKS
LKVIIRSSFTAIGLLTYLLAVNWKLTLTFFLFVPIIAAIVSVVGKRFRKLSHRIQNTMGD
VTHVTQEAINGYEVVRMYGGRKYENARFQAASNANRQQFMKLVVADNASVSVIQIMVGLA
TAVLVWFALAPGMVESMTPGVFASYIGAAASLAKPIRNLSEVYAEIQKGIAAAESIFEVF
DAPKEPLGGTLALPSPVTGAVTFEHLGFRYSEDGPAVLSDIDFSVQPGQTVALVGASGSG
KSTLVSLLSRFYEPTSGRILLDGVDITQVPVVSLREQISLVSQNIVLFNDTVYRNIAYGE
LEDKPEAEVQRAIDLAHARSFIEELPQGVQTVLGDNAQILSGGQRQRLAIARALLKDSPL
LVLDEATSALDNASERHIQAALAEVMKNRTTFVIAHRLSTIENADCILVMDQGRIVESGT
HSELLAKGGRYALLLQQQNSDIS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcgcggaggacacgctgccaagagttatatggaaaaatcttcccagccggtg
ctgaaacccgagcacggcgcccagacctatcgtcgccttctatcctacgccattccccag
tggccgctgttcgtaatagcggtgtttggtttcatgctgttttccagcatggaagtgttg
ctgatcgccgtcaccgagctgttgctggatgctgtgggtgtcgggatcgagcaggggcgg
ggattcctgtcgcagtttgtggcgaagttctttgccggcggcgttatgcctcaggaaacg
gcgcgctggctggtgccactggtgatgttggtgattatcggcctgcgcgcggttggcaat
tttgtcggcagctacggccttgcgtatgtggcgcgggcggttatccaccagctgcgcacc
gagctgtttgagcatatcgggcagttgcccagcgcctattttgaccgttataccggcgcc
tacctgatttccaaggtggcctacaacgtcgagcaggtcaccaactccattaccaagtcc
ctgaaggtgataatccgctcctcattcaccgccatcggtctgctgacctatctgctggct
gtgaactggaagctgactctgaccttcttcctgtttgtgccgatcattgccgccatcgtc
agcgtggtgggaaaacgcttccgcaaactgagccaccgcatccagaacaccatgggcgac
gtcactcacgtcacccaggaagcgatcaacggctatgaggtagtgcgcatgtacggcggg
cgcaaatatgaaaacgcccgcttccaggcagccagcaacgccaaccgccagcagttcatg
aaactggtggtggccgacaacgccagtgtctcggtaatccagatcatggtggggttggcg
acagcggtactggtgtggtttgcgctggcgccgggcatggtggagtccatgacaccgggc
gtgtttgcatcctatatcggtgctgccgcatccctggcaaagcccatccgcaacctctcc
gaggtgtacgcggaaatccagaagggcatcgccgcggcggagagtattttcgaggtgttc
gatgcgcccaaggagccgctcggcggcaccctggcgctgccgagcccggtcaccggtgcg
gtgacgttcgagcacctcggcttccgctacagcgaagacggcccagcggtactgagtgat
atcgacttcagtgtacagccggggcagaccgtcgcactggtcggcgcctccggctccggc
aagagcacactggtcagtctgctgtcccgtttctacgagccgacatccgggcgtatcctg
ctggatggggtggacatcacccaggtgcccgttgtatccctgcgcgaacagatcagcctg
gtatcgcagaacatcgtgttgttcaacgatacggtgtaccggaacatcgcctatggcgag
ttggaagacaagccggaagcggaagtgcagcgcgctatcgacctggcgcatgcgcgcagc
tttatcgaagagttaccccagggagtgcagacggtgctcggtgacaacgcgcagatcctt
tccggaggtcagcgccagcgtctcgcgattgcccgtgcgctgctgaaagattccccgtta
ctggtactggatgaagccacttccgcactggacaacgcttcggaacgccatattcaggcc
gcactggcagaggtgatgaaaaatcgcaccacctttgtcattgcgcaccgtctcagcacc
atcgaaaacgccgattgtattttggtgatggaccaggggcgtatcgtcgagagcggtacc
catagcgagctgctggcgaaaggcgggcgctatgcactgctgctgcaacagcagaacagc
gatatcagctga
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