Mycobacterium paragordonae: C0J29_07620
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Entry
C0J29_07620 CDS
T06847
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpag
Mycobacterium paragordonae
Pathway
mpag03420
Nucleotide excision repair
mpag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C0J29_07620
03430 Mismatch repair
C0J29_07620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpag03400
]
C0J29_07620
Enzymes [BR:
mpag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0J29_07620
DNA repair and recombination proteins [BR:
mpag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C0J29_07620
MMR (mismatch excision repair)
Other MMR factors
C0J29_07620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_11
C1_1
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AYE94664
LinkDB
All DBs
Position
1638828..1640936
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AA seq
702 aa
AA seq
DB search
MDGMPVMADPLIAGLDDEQREAVLAPRGPVCVLAGAGTGKTRTITHRIAQLVASGHVSAG
QVLAVTFTQRAAGEMRSRLRALDAAAQNGSRVDAVQALTFHAAAHRQLRYFWPRVVGNTR
WELLDTKFAVVARAASRCRFNVSTDDVRDLAGEIEWAKASLITPEQYAAAVAGAGRDTPL
DAEKVVAVYTAYEALKVRDEDVTLLDFDDLLLHTAAAIENDAAVAGEFRDRYRCFVVDEY
QDVTPLQQRVLSAWLGDRDDLTVVGDANQTIYSFTGASPRFLLDFSRRFPDATVVRLERD
YRSTPQVVSLANQVIAAARGRVAGSKLQLIGQREPGPAPSFREHPDEHTEAAAVAASIAQ
LIENGTAPSEIAILYRVNAQSEVYEEALTEAGIAYQVRGGEGFFNRQEIKQALLALQRAA
DRGADGAVADVVRGVLEPLGLTTEPPAGTKARDRWEALTALAELVDDELAQRPGLELPGL
VSELRLRADSRHPPVVQGVTLASLHAAKGLEWDAVFLVGLADGTLPISHALAHGPDSEPV
EEERRLLYVGITRARMHLALSWALARSQGGRQSRKPSRFLNGIAPQTRVEAAPGKSRRNK
GPARCRVCNKDLSTPAAIMLRRCESCAGDVDEDLLLQLKDWRLAAAKEQNVPAYIVFSDN
TLIAIAELRPTDDASLIAIPGIGARKLEQYGPEVLELIRQAR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatgccggtgatggccgatcccttgattgcagggctggacgacgagcagcgc
gaagcggtgctggccccgcgcggcccggtctgtgtgctggcgggtgccggcaccggcaag
acgcgcaccatcacgcatcgcatcgcccagctcgtggcgagtggtcacgtctccgccggt
caggtgctggcggtcaccttcacccagcgcgcggcgggtgagatgcggtcgcggctccgc
gcgctggacgcggcggcgcagaacggctcgcgtgtcgacgccgtgcaggcgctcaccttc
catgccgccgcgcaccgtcagctgcgttacttctggccccgcgtggtcggcaacacccgc
tgggaactgctcgataccaagttcgccgtcgtcgcccgcgcggccagccggtgccggttc
aacgtcagcaccgacgacgtgcgcgacctggccggcgagatcgagtgggccaaggcgtcg
ctgatcacgcccgagcagtacgcggcagcggtggcgggtgccggccgggacaccccgctg
gacgccgagaaggtggtggccgtctacaccgcttatgaggcgctcaaggtccgcgacgag
gacgtcaccctgctggacttcgacgacctgctgctgcacaccgccgcggcgatcgagaac
gacgccgcggtggccggcgaattccgggaccggtaccgctgcttcgtcgtcgacgagtac
caggacgtcaccccgctgcagcagcgggtcctgtcggcctggctcggtgaccgtgacgat
ctgaccgtcgtcggcgacgccaaccagaccatctactcgttcaccggcgcctccccgcgc
ttcctgctggacttctcgcggcgcttcccggacgcgacggtggtgcggctggaacgcgac
taccggtccaccccgcaggtcgtctcgctggccaaccaggtgatcgccgccgcccggggc
cgcgtcgcgggcagcaagctgcagctgatcggccagcgcgagcccggcccggcgccgtcg
ttccgggagcatcccgacgagcacaccgaggccgccgcggtcgcggcctccatcgcccag
ctgatcgaaaacggtactgcgccttcggaaatcgcgatcctgtatcgggtcaatgcgcag
tccgaggtctacgaagaggcgctgaccgaggccggcatcgcctaccaggtccggggcgga
gagggtttcttcaaccgccaggagatcaagcaggcgctgctcgcgctgcagcgtgcggcc
gaccgcggcgccgacggcgcggtggcagacgtggttcgcggtgtgctggagccactcggg
ctgacgaccgagccacccgccggcaccaaggcccgcgaccgttgggaagcgctgaccgca
ctggccgaactggtcgacgacgagctggcccagcgccccgggctggagctgccgggcctg
gtgtccgagctgcggttgcgggccgattcccggcacccaccggtggtgcagggcgtcacc
ctggcgtcgctgcacgccgccaagggtctcgagtgggacgccgtgtttctcgtcggcctg
gccgacggcacgctacccatttcccacgcattggcgcacggccccgacagcgagccggtc
gaggaagaacgccggctgctctatgtcggaatcaccagggcgagaatgcatttggcgctc
agttgggcattggcgcggtcccagggcggccggcagagccgcaagccgtcgcggtttctc
aacggcatcgccccccagacccgcgtagaggccgcgcccggcaagtcgcggcgcaacaag
ggtccggcgcgctgccgggtctgcaacaaggatctttcgacgccggcggccatcatgctc
cggcgctgcgaaagctgcgcgggcgatgtcgacgaggatctgctgctgcagctcaaagac
tggcgcctggcggcggctaaagaacagaacgtgccggcgtacatcgtgttcagcgacaac
accctgatcgcgatcgccgagttgcggcccaccgacgacgcgtcgctgatcgcgattcca
ggcatcggggcccgcaagctcgagcagtacgggccagaggtgctcgaactgatccgccaa
gcccgctga
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