Mycobacterium paragordonae: C0J29_18190
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Entry
C0J29_18190 CDS
T06847
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mpag
Mycobacterium paragordonae
Pathway
mpag03030
DNA replication
mpag03430
Mismatch repair
mpag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C0J29_18190
03430 Mismatch repair
C0J29_18190
03440 Homologous recombination
C0J29_18190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpag03032
]
C0J29_18190
03400 DNA repair and recombination proteins [BR:
mpag03400
]
C0J29_18190
Enzymes [BR:
mpag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C0J29_18190
DNA replication proteins [BR:
mpag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C0J29_18190
DNA repair and recombination proteins [BR:
mpag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C0J29_18190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AYE96436
UniProt:
A0ABQ1C612
LinkDB
All DBs
Position
3994860..3996773
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AA seq
637 aa
AA seq
DB search
MSVRMPNVTAMGATGGTQLSFTGLVTPDELSLRETTFVVVDLETTGGRAKGREGVTPDAI
TEIGAVKVCGGRVLGEFATLVDPQRSIPPQIVRLTGITTAMVCDAPTIEAVLPMFLDFAG
DSVLVAHNAGFDIGFLRAAAERCELPWPRPRVLCTVRLARRVLSREEAPSVRLAELARVF
AVATQPTHRALDDARATVDVLHALIERVGNQGIHTYADLRSYLPDVTPAQRRKRVLADGL
PHRPGVYLFRGPAGEVLYVGTAVDLRRRVSQYFNGSDPRGRMKEMVGLADGVDHVECAHA
LEAGVRELRLLAAHAPPYNRRSKFPHRWWWVVLTDEPFPRFSVIRNPRHDRAIGPFRSRA
DAADTAALLARFTGVRTCTKRLGRSALHGPVCPEVELAPCPAARDVTAAEYADATGRAQA
LIDGSDNSPLAAAVDQVSVLAGRHHYESAARLRDHIATAVEALWRGQRLRALSALPELIA
AAPDSEGGYQFAVIRHGQLAAAGGARRGVPPMPVVDAIQAGAQTVLPTQAPLGGALVEET
ALIARWLAAPGVRIVRVAVADDAAGWASPRGAAGAWAEWAATARSARLAGRQAETHSELL
AEPHPSREQVLGRATVDRGGGTSQPVLPRRQPFSAAG
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtgcgcatgcctaacgtcaccgccatgggcgccaccggtgggactcaactcagc
ttcaccgggttggtcacccccgacgagctgtcgctgcgcgagaccaccttcgtcgtcgtc
gacctggaaaccaccggcggacgcgccaagggccgggagggcgtcaccccggacgcgatc
accgagatcggcgcggtcaaggtgtgcggcggcagggtcctcggcgaattcgcgaccctg
gtcgacccgcaacgcagcattccgccgcagatcgtccgactgaccgggatcaccacggcc
atggtgtgcgacgctccgaccatcgaggccgtcctgccgatgttcctcgacttcgccggc
gactcggtgctggtagcccacaacgccggcttcgacatcggcttcctacgcgccgcagcc
gagcggtgcgagctgccgtggccccgtccccgggtcctgtgcacggtccggctggcgcgc
cgggtgctgagccgtgaggaagctcccagcgtgcggttggccgagctggcgcgcgtcttc
gccgtggcaacccagcccacccaccgcgctctcgacgacgcccgcgccaccgtcgacgtg
ttgcacgcactcatcgagcgggtcggcaaccagggcatccacacctacgccgacctgcgc
tcgtacctgccggacgtcacacccgcccagcgccgcaagcgtgtcctggccgacggcctg
ccgcaccggccgggcgtgtatctgttccggggtcccgcgggcgaggtgctctacgtcgga
accgcggtcgacctgcgccgccgggtgagccagtacttcaacggcagcgacccgcgtggc
cggatgaaggagatggtgggcctcgcggacggtgtggaccatgtcgagtgcgcgcacgcg
ctggaggccggcgtgcgcgagcttcggctgctggccgcgcacgccccgccgtacaaccgg
cgctcgaagttcccgcaccgatggtggtgggtggtgctgaccgatgagccgttcccccgg
ttctcggtgatccgcaatccacggcacgatcgcgccatcggcccgttccggtcgcgcgcc
gacgcggccgacaccgcggcactgctggcccgcttcaccggcgtacggacctgcaccaag
cggctgggccgttcggcgctgcacggcccggtctgccccgaggtggagctggcaccctgc
cccgccgcccgcgacgtgacggccgcggagtacgccgacgcgacggggcgcgcccaggcg
ttgatcgacgggtcggacaactcccccctggctgcggccgtcgaccaggtctcggtgctg
gccgggcgtcaccactacgagagcgcggcccggctgcgcgaccacatcgccaccgcggtc
gaggcgttgtggcgcggccagcgcctgcgggcgctgagcgcgctgcccgaactgatcgcc
gcggcacccgactcagaaggcggctaccagttcgcggtcatccgtcacggccaactcgcg
gctgcgggcggcgcccggcgcggcgtgcccccgatgccggtggtggacgcaatccaggcc
ggcgcccagacggtcctgccgacgcaggccccactgggtggggcgctggtcgaggaaacg
gcgctcatcgcacgctggctggccgcacccggggtccgcatcgtccgggtggcagtcgcc
gacgacgccgccggctgggcgtcaccgcggggcgcggccggcgcctgggcggagtgggcg
gccaccgcccggtcggcgcggctggccggccgccaggccgaaacgcactcagagctgctg
gctgaaccgcacccatcgcgcgagcaggtgctcggccgcgccactgtcgatcgcggcggc
ggcacgtcgcagcccgtcctcccacgccggcagccattcagcgcggctggataa
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