Mycobacterium paragordonae: C0J29_22960
Help
Entry
C0J29_22960 CDS
T06847
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mpag
Mycobacterium paragordonae
Pathway
mpag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C0J29_22960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpag03019
]
C0J29_22960
03009 Ribosome biogenesis [BR:
mpag03009
]
C0J29_22960
Enzymes [BR:
mpag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C0J29_22960
Messenger RNA biogenesis [BR:
mpag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C0J29_22960
Ribosome biogenesis [BR:
mpag03009
]
Prokaryotic type
rRNA helicases
C0J29_22960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
UvrA_inter
HEM4
CMS1
Motif
Other DBs
NCBI-ProteinID:
AYE97213
UniProt:
A0ABQ1C913
LinkDB
All DBs
Position
complement(5119521..5121266)
Genome browser
AA seq
581 aa
AA seq
DB search
MDLPENSPPETFADLQIHPDVVRAIAAVGYESPTGIQAATIPALMAGSDVVGLAQTGTGK
TAAFALPILSKIDTTSKATQALVLAPTRELALQVAEAFSRYGALRNLTVLPIYGGASYGV
QLAGLRRGAQVVVGTPGRVIDHLERGTLDLSRVDYLVLDEADEMLTMGFAEEVDRILSET
PEYKQVALFSATMPPAIRKITTKYLHDPLEVTSKAKTATAENISQRYIQVAGPRKMDALT
RVLEVEPFEAMIVFVRTKQATEEVAERLRARGFSAAAINGDIPQGQRERTIAALKDGSID
ILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGSALLFVSPRERHLL
KAIEKATRQTLVEAELPTVEDVNAQRVAKFADSITDALGSQGIELFRRLVEDYEREHDVP
MADIAAALALQSRDGEAFLLSPDPPPERRKERKERDESRERPERPRQTKPFTTYRIDVGK
RHRIGPGAIVGAIANEGGLHRSDFGHIAIGPDFSMVELPAKLPRETLKKLEHTRISGVLI
NLRPDRGSGSAGGRSHPGGRENSRAPRKPAGKGKPSRKRDA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggacctcccggagaattctccccccgaaaccttcgccgacctgcagatccaccccgat
gtggtgcgtgcgatcgctgccgtcggctatgaatccccgaccgggattcaggcggccacg
atcccggcgctgatggccggttccgacgtcgtcggcctggcgcagaccggcaccggcaag
acggccgccttcgcgctgccgatcctgtccaagatcgacaccaccagcaaagccacccag
gcgctggtgctggcccccacccgcgaactggcactgcaggtggccgaggccttcagccgc
tacggggcactgcggaacctgaccgtcctgccgatctacggcggagcctcctacggcgtg
caactcgccggtctgcgccgcggcgcccaggtcgtcgtcggcaccccgggccgcgtcatc
gaccacctggagcgcgggacgctggatctgtcccgggtggactacctggtgctcgacgag
gccgacgagatgctcaccatgggcttcgccgaagaggtcgaccgcatcctgtccgaaacg
ccggaatacaagcaggtggccctcttctcggcgaccatgccgccggccattcgcaagatc
accaccaagtacctgcacgatccgctggaagtcacgtctaaagcgaaaacggctaccgcc
gagaatatttcgcagcgctatatccaggtggcgggcccacgcaagatggatgcgctgacg
cgggtgctcgaggtcgagccgttcgaagcgatgatcgtcttcgtgcgcaccaagcaggcc
accgaagaggtggccgaaagactgcgcgcccgaggcttttccgcggctgccatcaacggc
gacatcccgcaagggcagcgggagagaacgatcgcggcactcaaggacggaagcatcgac
atcctggtggccaccgacgtcgccgcccgcggactggatgtggagcgcatctcccacgtg
ctcaactacgacatcccgcatgacaccgagtcctatgtgcaccgcatcgggcgcaccggc
cgcgccggccggtccggcagtgcgttgctgttcgtgtcgccccgggagcgccacctgctc
aaggcgatcgaaaaggccacgcggcaaacacttgtcgaggccgaactgcctaccgtggag
gatgtcaacgcccagcgggtagccaagttcgccgactcgatcaccgacgccctcggcagc
caaggcatcgagctgttccgccggctggtggaggattacgaacgcgaacacgacgtgccg
atggctgacatcgccgcagcgctggcgctgcaatctcgcgacggtgaagccttcctgctc
tcgccggatccgccgccggagcggcgcaaagagcgcaaggaacgggacgaaagtcgcgag
cgccccgaacggccaaggcaaacaaagcctttcacgacctaccggatcgacgtgggcaag
cggcaccggatcggcccgggcgcgatcgtcggcgccatcgcgaacgagggaggcttgcac
cgtagcgatttcggtcatatcgcgatcgggcccgatttctcgatggtggaacttccggcg
aagctgccccgggaaacgctgaaaaagcttgaacatacccgtatttcgggtgtgctgatc
aacctgcggccggaccggggctccggcagtgccggcggccggagccatccgggcggccgg
gaaaattcccgcgccccgcgaaaacccgccggcaagggaaagccgagccggaagcgcgac
gcatga
DBGET
integrated database retrieval system
