KEGG   Mycobacterium paragordonae: C0J29_22960
Entry
C0J29_22960       CDS       T06847                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
mpag  Mycobacterium paragordonae
Pathway
mpag03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpag00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C0J29_22960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpag03019]
    C0J29_22960
   03009 Ribosome biogenesis [BR:mpag03009]
    C0J29_22960
Enzymes [BR:mpag01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     C0J29_22960
Messenger RNA biogenesis [BR:mpag03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     C0J29_22960
Ribosome biogenesis [BR:mpag03009]
 Prokaryotic type
  rRNA helicases
   C0J29_22960
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII UvrA_inter HEM4 CMS1
Other DBs
NCBI-ProteinID: AYE97213
LinkDB
Position
complement(5119521..5121266)
AA seq 581 aa
MDLPENSPPETFADLQIHPDVVRAIAAVGYESPTGIQAATIPALMAGSDVVGLAQTGTGK
TAAFALPILSKIDTTSKATQALVLAPTRELALQVAEAFSRYGALRNLTVLPIYGGASYGV
QLAGLRRGAQVVVGTPGRVIDHLERGTLDLSRVDYLVLDEADEMLTMGFAEEVDRILSET
PEYKQVALFSATMPPAIRKITTKYLHDPLEVTSKAKTATAENISQRYIQVAGPRKMDALT
RVLEVEPFEAMIVFVRTKQATEEVAERLRARGFSAAAINGDIPQGQRERTIAALKDGSID
ILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGSALLFVSPRERHLL
KAIEKATRQTLVEAELPTVEDVNAQRVAKFADSITDALGSQGIELFRRLVEDYEREHDVP
MADIAAALALQSRDGEAFLLSPDPPPERRKERKERDESRERPERPRQTKPFTTYRIDVGK
RHRIGPGAIVGAIANEGGLHRSDFGHIAIGPDFSMVELPAKLPRETLKKLEHTRISGVLI
NLRPDRGSGSAGGRSHPGGRENSRAPRKPAGKGKPSRKRDA
NT seq 1746 nt   +upstreamnt  +downstreamnt
atggacctcccggagaattctccccccgaaaccttcgccgacctgcagatccaccccgat
gtggtgcgtgcgatcgctgccgtcggctatgaatccccgaccgggattcaggcggccacg
atcccggcgctgatggccggttccgacgtcgtcggcctggcgcagaccggcaccggcaag
acggccgccttcgcgctgccgatcctgtccaagatcgacaccaccagcaaagccacccag
gcgctggtgctggcccccacccgcgaactggcactgcaggtggccgaggccttcagccgc
tacggggcactgcggaacctgaccgtcctgccgatctacggcggagcctcctacggcgtg
caactcgccggtctgcgccgcggcgcccaggtcgtcgtcggcaccccgggccgcgtcatc
gaccacctggagcgcgggacgctggatctgtcccgggtggactacctggtgctcgacgag
gccgacgagatgctcaccatgggcttcgccgaagaggtcgaccgcatcctgtccgaaacg
ccggaatacaagcaggtggccctcttctcggcgaccatgccgccggccattcgcaagatc
accaccaagtacctgcacgatccgctggaagtcacgtctaaagcgaaaacggctaccgcc
gagaatatttcgcagcgctatatccaggtggcgggcccacgcaagatggatgcgctgacg
cgggtgctcgaggtcgagccgttcgaagcgatgatcgtcttcgtgcgcaccaagcaggcc
accgaagaggtggccgaaagactgcgcgcccgaggcttttccgcggctgccatcaacggc
gacatcccgcaagggcagcgggagagaacgatcgcggcactcaaggacggaagcatcgac
atcctggtggccaccgacgtcgccgcccgcggactggatgtggagcgcatctcccacgtg
ctcaactacgacatcccgcatgacaccgagtcctatgtgcaccgcatcgggcgcaccggc
cgcgccggccggtccggcagtgcgttgctgttcgtgtcgccccgggagcgccacctgctc
aaggcgatcgaaaaggccacgcggcaaacacttgtcgaggccgaactgcctaccgtggag
gatgtcaacgcccagcgggtagccaagttcgccgactcgatcaccgacgccctcggcagc
caaggcatcgagctgttccgccggctggtggaggattacgaacgcgaacacgacgtgccg
atggctgacatcgccgcagcgctggcgctgcaatctcgcgacggtgaagccttcctgctc
tcgccggatccgccgccggagcggcgcaaagagcgcaaggaacgggacgaaagtcgcgag
cgccccgaacggccaaggcaaacaaagcctttcacgacctaccggatcgacgtgggcaag
cggcaccggatcggcccgggcgcgatcgtcggcgccatcgcgaacgagggaggcttgcac
cgtagcgatttcggtcatatcgcgatcgggcccgatttctcgatggtggaacttccggcg
aagctgccccgggaaacgctgaaaaagcttgaacatacccgtatttcgggtgtgctgatc
aacctgcggccggaccggggctccggcagtgccggcggccggagccatccgggcggccgg
gaaaattcccgcgccccgcgaaaacccgccggcaagggaaagccgagccggaagcgcgac
gcatga

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