Mycobacterium paragordonae: C0J29_25105
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Entry
C0J29_25105 CDS
T06847
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpag
Mycobacterium paragordonae
Pathway
mpag03420
Nucleotide excision repair
mpag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C0J29_25105 (pcrA)
03430 Mismatch repair
C0J29_25105 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpag03400
]
C0J29_25105 (pcrA)
Enzymes [BR:
mpag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0J29_25105 (pcrA)
DNA repair and recombination proteins [BR:
mpag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C0J29_25105 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
C0J29_25105 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
CarD_TRCF_RID
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AYE97575
UniProt:
A0ABQ1CA43
LinkDB
All DBs
Position
complement(5629750..5632152)
Genome browser
AA seq
800 aa
AA seq
DB search
MSVHVTQAKYPRPSAVDELLDGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRIAYLI
AERGVSVGQILAITFTNKAAAEMRERVVNLVGDRARYMWVSTFHSSCVRILRNQASLIEG
LNSNFSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPHQAVSNLTDE
SDDLARTVASVFGEYQRRLRAANALDFDDLIGETVAVLQTFPDIAQYYRRRFRHVLVDEY
QDTNHAQYMLVRELVGHGGSARLDGVGPGAGGGEVKLGPPNEPTGSDEVPPAELCVVGDA
DQSIYAFRGATIRNIEDFERDYPNATTILLEQNYRSTQNILSAANSVIARNAGRREKRLW
TDAGEGELIVGYVADNEHDEARFVADEIDALADRGDITYNDVAVFYRTNNSSRSLEEVFI
RAGIPYKVVGGVRFYERKEIRDIVAYLRVLDNPGDAVSMRRILNTPRRGIGDRAEACVAV
YAENTGASFADALQAAAEGKVPMLNTRAEKCIAGFVELLDELRGHLDDDLGELVEAVLER
TGYRRELESSTDPQELARLDNLNELVSVAHEFSTDLANAAALAEDAPEDEDVPDTGVLAA
FLERVSLVADSDEIPEHGAGMVTLMTLHTAKGLEFPVVFVTGWEDGMFPHMRALDDPMEL
SEERRLAYVGITRARQRLYVSRAIVRSSWGQPMLNPESRFLREIPQQLIEWRRVAPKPSF
SAPVSGAGRFGTPRSAPTRSGAGKRPLVVLEPGDRVTHDKYGLGRVEEVSGVGESAMSLI
DFGSAGRVKLMHNHAPISKL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcacgtaacccaagccaagtacccacgtcccagcgcggtcgacgaactcctg
gacggactcaacccgcaacagcgccaggcggtggtgcatgaaggctcgccgctgttgatc
gtcgcgggcgcaggttccggtaagaccgcggtgctgacgcgccgcatcgcctacctgatc
gccgaacgcggcgtcagcgtcggtcagatcctggccatcaccttcaccaacaaggccgcc
gccgagatgcgggagcgggtggtgaatctcgtcggtgaccgcgcccggtacatgtgggtg
tcgaccttccactcgtcctgcgtgcggatcctgcgcaaccaggcatcgctgatcgaggga
ctcaactccaacttctccatctacgacgccgacgactcgcggcgcctgctgcagatgatc
ggccgcgacatgggtctggacatcaagcggtactcgccgcgactgctggccaacgccatt
tcgaatctgaagaacgagctgatcgacccgcatcaggcggtgtccaacctcaccgacgaa
tccgacgacctggcccgtaccgtcgcgtccgtcttcggcgaataccagcgccggctgcgg
gcggccaacgcgctcgacttcgacgacctgatcggcgagaccgtggcggtgctgcagacc
ttcccggacatcgcccagtactaccggcggcggttccgccatgtgttggtcgacgagtac
caggacaccaaccacgcccagtacatgctggtgcgcgagttggtcgggcacggcggttca
gcgaggctcgacggagtcgggccgggggccggcggaggcgaggtgaagctgggaccgccg
aatgaacccaccggttccgacgaggtgccgccggccgaactgtgcgtggtcggtgacgcc
gaccagtccatctacgccttccgtggcgcgaccatccgcaacatcgaagacttcgagcgc
gactacccgaacgccacaacgattctgctggaacagaattaccgctcgacgcagaacatc
ctctcggcggccaactcggtgatcgcccgcaacgccgggcggcgggagaagcggctgtgg
accgacgccggcgaaggcgaactgatcgtcgggtacgtcgccgacaacgagcacgacgag
gccaggttcgtggccgacgagatcgacgcgctggccgaccgcggcgacatcacctacaac
gacgtcgccgtcttctaccgcaccaacaactcgtcgcgctcgctggaagaggtcttcatc
cgcgccggcatcccctacaaagtcgttgggggagtgcgcttttacgagcgcaaggagatc
cgcgacatcgtggcctacctgcgggtgctggacaaccccggtgacgcggtgagtatgcgg
cgcatcctcaacaccccgcgtcgcggcatcggcgatcgcgccgaggcgtgtgtcgcggtg
tacgccgagaacaccggcgccagcttcgccgacgccctgcaggcagccgccgagggcaag
gtgccgatgctcaatacccgcgcggagaagtgcattgccggcttcgtcgaactgctcgac
gagctgcgggggcacctcgacgatgacctcggcgagctggtcgaggcggtgctggagcga
accggatatcgccgcgagctggaatcgtcgaccgatccgcaggagctggcccggctggac
aacctcaacgaattggtcagcgtcgcacacgaattcagcaccgatctggccaacgcggcc
gctctggccgaagacgcgccggaggacgaggacgtcccggacaccggtgtgctggcggct
tttctggagcgggtgtcgctggtcgccgattccgacgagatcccggagcacggcgccgga
atggtcaccctgatgaccctgcacaccgccaaggggctggagttcccggtggtgttcgtg
acgggctgggaagacggcatgttcccgcacatgcgggcgctggacgatccgatggaactg
tccgaggaacggcgtctggcttatgtcggaatcacccgggcccggcaacggctgtacgtg
agccgggcgatcgtccggtcatcgtgggggcagcccatgctgaacccggaatcgcgcttc
ctgcgcgagattccgcaacaactcatcgagtggcgtcgggtggcgcccaagccgtcattc
agtgcgccggtgagcggtgccgggcgcttcggtaccccccggtcggcgccgacccgttcc
ggggcgggcaagcggccactggtggtgctggagcccggtgaccgggtgacgcacgacaag
tacgggctggggcgggtcgaggaggtctccggcgtcggtgagtcggcgatgtcgctgatc
gacttcggcagcgcggggcgggtcaagctgatgcataaccacgcgccgatcagcaagctc
tga
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