Mycobacterium paragordonae: C0J29_25665
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Entry
C0J29_25665 CDS
T06847
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mpag
Mycobacterium paragordonae
Pathway
mpag03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpag00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C0J29_25665
09124 Replication and repair
03420 Nucleotide excision repair
C0J29_25665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpag03021
]
C0J29_25665
03400 DNA repair and recombination proteins [BR:
mpag03400
]
C0J29_25665
Enzymes [BR:
mpag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0J29_25665
Transcription machinery [BR:
mpag03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
C0J29_25665
DNA repair and recombination proteins [BR:
mpag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
C0J29_25665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
AYE97675
LinkDB
All DBs
Position
5770814..5772463
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHIHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSFDRAVLEEVL
RNKKIAPMLGTRIDDDTVAVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHAISLEPDGW
ELRDYQQLAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAQATTLILVTNIVAARQWKRE
LVARTSLTEDEIGEYSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTMTDNERMIYATAEPEERYKLCSTVHTKIAVVKSILKNHPGEQTLVIGAYLD
QLDELGAELGAPVIQGSTKTREREDLFDQFRRGEIATLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgggccgttgatcgtgcagtccgacaagaccgtgctgctcgaagtcgatcac
gagttggccggggcggcgcgcgccgccatcgcgccgttcgccgagctggagcgcgcgccc
gaacacatccacacctaccgcatcacgccgttggccctgtggaacgcgcgcgccgccggg
cacgacgccgagcaggtggtcgacgcgctggtcagcttctcccgctacgcggtgccgcaa
cccctgctggtcgacatcgtcgacaccatggcccgctacggccgcctgcaactggtcaag
caccccgcgcacggcctgacactggtgagcttcgatcgcgccgttctcgaagaagtgctg
cgcaacaagaagattgcgccgatgctcggcacccgaatcgacgacgacaccgtcgccgtc
catcccagcgagcgcggccgggtcaagcagctgctgctcaagataggctggccggccgag
gatctcgccggctacgtggacggcgaagcccacgcgatcagcctcgagcctgacgggtgg
gaactgcgcgactaccaacagcttgcagccgactcgttctgggccggcggctcgggcgtg
gtggtgctgccctgcggcgccggcaagacgctggtcggtgcggccgcgatggccaaagcc
caagccacgacacttattctggtcaccaacatcgtggcggcccggcagtggaagcgcgag
ctggtggcccggacttcgctcaccgaggacgagatcggcgaatactccggcgagcgcaag
gagattcggcccgtcaccatctcgacctaccagatgatcacgagacgcaccaagggcgag
taccgacacctggagctgttcgacagccgcgactggggtctgatcatctacgacgaggtg
cacctgctgccggcaccggtgttccggatgaccgccgacctgcaatccaagcgacgcctg
ggcctcaccgccacgctgatccgcgaggacggccgcgaaggtgacgtgttctcgctcatc
gggccgaagcggtacgacgcaccctggaaggacatcgaggcccagggctggatcgcgccg
gccgagtgtgtcgaagtccgggtcaccatgaccgacaacgaacggatgatctacgccacg
gccgaacccgaggagcgctacaagctgtgctcgacggtgcacaccaaaatcgctgtggtg
aagtcgattttgaagaatcaccccggcgagcagaccctggtgatcggcgcctacctcgat
caactcgacgagctgggtgccgagctgggggccccggtgatccaggggtcgaccaagacc
cgggaacgcgaggacctgttcgaccagttccggcgtggcgagatcgcgaccctggtggtg
tccaaggtggccaacttttccattgacctgccggaagcctctgtcgcagttcaggtttcg
ggcaccttcgggtcgcgccaggaggaagctcaacgcctgggccggttgctgcgacccaag
gcagacggaggcggcgccatcttctactcggtggtggcgcgcgacagcctcgacgccgaa
tatgccgcgcaccggcagcgctttctggccgagcagggctacgggtacatcatccgtgac
gcggacgacctgctcggcccggccatttaa
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integrated database retrieval system
