Mus pahari (shrew mouse): 110312746
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Entry
110312746 CDS
T05929
Symbol
Gigyf1
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110312746 (Gigyf1)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110312746 (Gigyf1)
Surveillance factors
Other surveillance factors
110312746 (Gigyf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
110312746
NCBI-ProteinID:
XP_021042248
Ensembl:
MGP_PahariEiJ_G0024463
LinkDB
All DBs
Position
23:27634577..27651750
Genome browser
AA seq
1045 aa
AA seq
DB search
MAAETLNFGPEWLRALSSGGSVASPPPSPAMPKYKLADYRYGREEMLALYVNENKVPEEL
QDKEFAAVLQEEPLQPLALEPLTEEEQRNFSLSVNSVAVLRLMGKGAGPPLAATSRGRGS
TRSRGRGRGDSCFYQRSIEEGDGTFGRSPREIQRSQSWDDRGERRFEKPARRDGVRSGFE
EGGAGPRKEHARSDSENWRSLREEQEDDGSWRLGAGPRRDGDRWRSTSPDGGPRSAGWRE
HGERRRKFDFDLRGERGGCGEEDGRVGGGNSHLRRCRGLDGFEDDKDGLPEWCLEDEDEE
MGTFDASGAFLPLKKGPKEPIPEEQELDFQGLEEEEEEPSEGVDEERPEAGGKEATPLPP
PEKSSSPSSLPALGPLWTTNEEGGEAVEKELPPAEGDELRGLSLSPRIGSPPGPPGDLED
EEGLKHLQQEAEKLVASLQDCSLEEEQFTAAMQTQGLRHSTAATALPLSHGAARKWFYKD
PQGEIQGPFTTQEMAEWFQAGYFSMSLLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPP
LLGNMDQERLKKQQELAAAALYQQLQHQQHFLQLVGSRQLPQCTTLREKAAMGDLTPPQP
PQQQQQLTTFLQQLQALKPPRGGDQNLLPTMSRSLSVPDSGPLWDLHTSASSQSGGEASL
WDIPINSSTQGPILEQLQLQHKFQERREVELRAKREEEERKRREEKRRQQQQQQQQEEQK
RRQEEEELFRRKQVRQQELLLKLLQQQQATNVPVPPAPSSPPPLWAGLAKQGLSMKTLLE
LQMESERQLHKQAAPREPLRSQAPNHRVQLGGLGSAPLNQWVSEAGPLWGGPDKSGGSGS
GNLGLWEETLKSGGSLARSLGLKNSRSSPSLSDSYSHLSGRPVRKKTDEEEKLLKLLQGI
PRPQDGFTQWCEQMLHTLSTTGSLDVPMAVAILKEVESPYDVHDYIRSCLGDTLEAKEFA
KQFLERRAKQKASQQRQQQQQQQQQDAWLSSPSLQTAFQSNHSTKLGPGEGSKAKRRALM
LHSDPSILGYSLHGPSGEIESVDDY
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagacactcaactttgggcctgagtggctgagagccctttctagtggtggc
agtgtggcctctccacccccatctcctgccatgcccaaatacaagctggcagattaccgc
tatgggcgagaggagatgctggccctctatgtcaacgagaacaaggtcccggaggaacta
caggacaaggagtttgctgcagtgttacaagaggaaccgctgcaacctctggctctggaa
cctctgaccgaggaggagcagagaaacttctcgctgtcggtgaacagtgtggctgtactg
agactgatggggaaaggggctgggccccctttggctgccacctcccgtggcaggggcagc
actcggagccgagggcgaggccgtggtgacagctgcttttaccaaagaagcattgaggaa
ggcgatgggacctttggaaggagtcctcgggaaatccagcgaagccaaagctgggatgac
agaggtgagaggcggtttgagaagcctgcaaggagggatggagtacgatctggctttgag
gagggaggggctggcccaaggaaggaacacgcgcgctcagacagtgagaattggcgctca
cttcgagaggagcaagaggatgatggcagctggagacttggggcagggccccggcgagat
ggtgatcgctggcggtccaccagccctgatggcggtccccgctctgctggctggcgggag
cacggggagcggaggcgcaagtttgattttgatctgcgaggggagcgcggagggtgtggt
gaagaggacgggcgggttgggggcggcaactctcacctccggagatgccgggggctcgat
ggctttgaagatgacaaggatgggctcccagagtggtgcttagaggatgaggatgaggag
atgggcacttttgatgcctccggagccttcctgccccttaagaagggccccaaggagccc
attcctgaggagcaagagctggatttccagggcctagaggaagaggaagaggagccatca
gaaggggtggatgaagagaggcctgaggcaggagggaaggaagcaaccccattgcctcct
ccagagaaatcgagctccccgtcttcactgccagccttgggtcctctctggacgacgaat
gaggagggtggtgaggcagtggagaaagagctgccccctgctgaaggagacgagttgagg
ggactgtctctgagtcctagaatcggttcacctcctggcccacctggagatctagaagat
gaagaaggcttgaagcacttgcagcaggaggcagagaagctggtggcctccctgcaggac
tgttccctggaggaggagcagttcaccgctgccatgcagacccagggcctgcgccactcc
acagctgccactgcccttcccctcagccatggcgctgcccgaaagtggttctacaaggac
ccacagggggaaatccaaggccctttcacgacccaggagatggctgagtggttccaggct
ggttacttctccatgtcactcttagtgaagaggggctgcgatgagggtttccagcctctg
ggagaggtgatcaagatgtggggccgtgtgccctttgccccagggccctcgccacccccg
ctgctggggaacatggatcaggagcggctgaagaagcagcaggagctggctgcggcagcc
ctgtaccagcagctgcagcaccagcagcactttctgcagctggttggcagtcgccagctc
ccgcagtgtacaacgctccgggaaaaggcagctatgggggacctgacgccgccgcagccg
ccgcagcagcagcagcagctcactacgttcctgcagcagctccaggctctcaaacccccc
agaggtggggaccagaacctgctcccgacgatgagccggtccttgtcggtgccagattca
ggccccctctgggacttacatacctcagcttcatcacagtcaggtggtgaggccagtctt
tgggacataccaattaactcttcgactcagggtccaattctagaacagctccagctgcaa
cataaatttcaagagcgcagagaagtggagctcagggcgaagcgggaggaggaggagcgg
aaacggcgggaggagaagcggcgccagcagcagcagcagcagcagcaggaggagcagaag
cggcggcaggaagaggaggagctctttcggcgcaagcaggtacggcagcaggaattgttg
ctgaagctgctacagcagcagcaagcgacgaatgtccctgtgccccctgcccccagctcc
ccacccccactctgggctggcctagccaaacagggcctgtccatgaagactctgctggag
ctacagatggaaagcgagcgccaactgcacaagcaggcggcaccgcgggagcctctgcgg
tcccaggcccccaaccaccgagtgcagcttgggggcttgggctctgcccccctgaaccag
tgggtgtctgaggctgggccactgtggggcgggccagacaagagtgggggcagcggcagt
ggcaacctgggactctgggaagaaactctcaagagtggcgggagcctggcccggagcctg
ggcttaaagaacagtcggagcagcccgtctctcagtgactcgtacagccacctgtcaggc
cggcctgttcgcaaaaagacggacgaggaagagaagttgctgaagctgctgcagggcatc
cctcggccccaggacggcttcacccagtggtgtgagcagatgctgcacaccctgagtacc
acgggcagcctggatgtgcccatggctgtcgcgatcctcaaggaggtggagtccccttat
gatgtccatgattatattcgttcctgcctgggggacacgctggaagccaaagaatttgcc
aaacaattcctggagcggagggccaaacagaaagccagccaacagcggcagcagcagcaa
cagcagcagcagcaggacgcctggctgagcagcccctccctacagacagcctttcagtcc
aaccacagcaccaaactgggccccggggagggcagcaaggccaagaggcgagcgctgatg
cttcactccgacccgagcatcctggggtactccctgcacggcccttccggtgagattgag
agcgtggatgactactga
DBGET
integrated database retrieval system
