Mus pahari (shrew mouse): 110312769
Help
Entry
110312769 CDS
T05929
Symbol
Usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mpah01002
]
110312769 (Usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110312769 (Usp42)
Enzymes [BR:
mpah01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110312769 (Usp42)
Peptidases and inhibitors [BR:
mpah01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110312769 (Usp42)
Ubiquitin system [BR:
mpah04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110312769 (Usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
110312769
NCBI-ProteinID:
XP_021042295
Ensembl:
MGP_PahariEiJ_G0024557
LinkDB
All DBs
Position
23:complement(33812779..33835404)
Genome browser
AA seq
1320 aa
AA seq
DB search
MTIVDKTEPSDPSTCQNQPGSSEAVSPEDMDTGSASWGAVSSISDVSNHTLSLGPVPGAV
VYSNSSVPEKSKPSPPKDQVLGDGIAPPQKVLFPSEKICLKWQQSHRVGAGLQNLGNTCF
ANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPGDVIKPMFVIN
EMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSR
VKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPAS
KRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLV
HTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRAVLNQQAYVLFYIRSHDVKNGGEP
AHPAHSPGQSSPRPGLSQRVVNNKQAAPGFLGPQLPSHVIKNTPHLNGTTPVKDTPSSSM
SSPNGNTSVKRASPATASTSVQNWSVNRPSVIPDHPKKQKITISIHNQLPARQGQAPLSN
SLHGSCLEAPSKAAPSSTITNPSAIQSTSNVPTTSASSSEACPQPMVNGKAKVGASVLVP
YGAESSEESDEESKGLARENAVDMMAGTHSDRPEAAADDGAEASSHELQEPVLLNGANSA
DSDSRENSLAFDNASCQVQPELHTENLFSKLNGLPGKVTPAALQSVPEDRILETFKLTNQ
AKGPAGEESWTMTGGSSPKDPVSQPEPIRDEPSPLEIAEAVTNGSTQTPPTTSPLEPTIS
CTKEDPSVVVSAEPVEGLPSVPALCNSTGTTLGDTPVPESCDPGDLTANPSQPTQAVKGD
TAEKAQDSALAEVVERLSPAPSVLTGDGCEQKLLVYLSTEGPEEVEDSSRSLAVSGDTIP
PQPDRTTTSSCEGAAEQAAGDRGHVGPKAQDPSPAKEKMSSLRKVDRGHYRSRRDRSSSG
EHVRDSRPRPEDHHHKKRRCYSRERPKQERHPANTYCNGSQHLGHGDRASPERRSLSRYS
HHHSRIRSGLEQDWSRYHHLENEHAWIRERVYPDKLRWDKCRYYHDRYTPLYMARDAREW
RPLHGREHERLVQSGRPHKDSYWGRKGWELQSRGKERPHFNSPREAPGLAVPLERHLQEK
AAMSVDSSHSLPERFHEHESVKSRKRRYETLENNDGRLEKKVHKSLEKDSLEEPRVKKHK
KSKKKKKSKDKHRDRESRHQQESDFSGAYSDADLHRHRKKKKKKKRHSRKSEDFIKDAEM
HLPKLSSYEAAGHFRRTEGTFLLADGLPMEDSGSFREKTKHLRMESRPDRCHLSEYGQGN
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaaactgaaccttcagacccatcaacctgtcagaaccagcctggc
agttctgaggcagtctcacctgaagacatggacacaggctctgccagctggggtgctgtg
tcttcaataagtgatgtctcaaatcatacactttcattagggccagtgcctggtgctgtg
gtttattctaattcgtctgtacctgaaaaatcaaaaccatcgccaccaaaggatcaagtc
ctaggtgatggcattgctcctcctcaaaaggtcctgtttccatctgaaaagatttgtctt
aagtggcaacaaagtcatcgagttggcgctgggctccagaatttgggcaacacctgtttt
gccaatgccgcattgcaatgcctgacttacacgccacccctcgccaattacatgttatcc
catgaacactccaagacatgccacgcagaaggattttgtatgatgtgcaccatgcagaca
cacattacccaggcacttagcaaccccggggatgttatcaagccgatgttcgtcatcaat
gagatgcggcgtatagctagacacttccgttttggaaaccaagaagatgcccatgaattt
cttcagtacacggtcgatgccatgcagaaagcatgtttaaatggcagtaataaattagac
agacacacccaggccaccaccctggtctgccagatattcggaggctacctaagatcccga
gttaaatgtttaaattgcaagggtgtttcagatacctttgatccatatctggacataaca
ttggagattaaggctgcacagagtgttaccaaggccttagagcagtttgtgaagccagaa
caactggatggagaaaactcttacaaatgtagcaagtgcaaaaaaatggttccagcttca
aagagattcacaatccataggtcttctaatgttcttaccatctcactgaagcggtttgcc
aacttcactggtggaaagattgctaaggatgtgaaatatcccgagtaccttgatattcgg
ccctatatgtctcagcccaatggagagccaattatttatgttttgtatgctgtgctggtg
cacactggttttaactgtcatgctggccactacttttgttacatcaaggctagcaatggc
ctctggtatcagatgaatgactccatcgtgtccaccagtgatattagagcggtgcttaac
cagcaagcttacgtgctcttttatatcaggtcccatgatgtgaaaaatggaggggagccc
gctcatcctgcccatagccccggccagtcctctccccgcccaggcctcagtcagcgggta
gtcaacaacaagcaggcggccccagggtttcttggaccccagctgccttcccacgtgata
aagaacacgccacacttgaatggcactacgccagtgaaagacacaccaagtagttctatg
tcaagccctaatggaaacaccagcgtcaagagggccagtcctgctactgcttcgacttct
gtacagaactggtctgttaacaggccctcagttattccagatcaccccaagaaacaaaag
atcaccatcagtattcacaaccagttgcctgctcgccagggtcaggcaccgctaagtaac
agcctccatggctcttgtctggaggctcctagcaaggcggcaccctcctccaccatcact
aacccttctgcaatacagtctacctcgaatgtacccacgacgtcggcttcttccagtgag
gcctgtccccagcccatggtgaacggcaaggctaaagtgggtgccagtgtgcttgtcccc
tatggggctgagtcctcggaagagtctgatgaggagtcaaagggcctggccagggagaat
gctgtggacatgatggccggcactcactccgataggccagaagctgctgcagatgacggt
gctgaggcttcctcccatgagcttcaagaacccgtcctgctgaatggtgctaatagcgca
gacagtgactcgcgagagaacagcctggcatttgacaatgccagctgccaggtccagccc
gagctgcacacagaaaacctcttttccaaacttaatggtcttcctggaaaggtgacgcct
gctgctttgcagtctgttcctgaagacagaattcttgagaccttcaagcttaccaaccag
gcaaagggtccagcgggtgaagagagttggactatgacagggggaagctctccaaaggat
cctgtttcacagccagagcccatccgtgatgagcccagtccccttgagatagcggaggct
gtcaccaatgggagcacacagacccctcccaccacgtcacccttggagcccaccatcagc
tgtaccaaagaagacccgtccgttgttgtctcagctgaacctgtggagggtttgccttct
gtccctgctctttgtaacagcaccggtactaccttgggggataccccagtgcccgaatcg
tgtgaccctggagacttgactgccaacccgagccagccaacccaagcagtgaaaggtgat
acagctgagaaggctcaggactctgccttggctgaagtggtggagaggctgagccctgct
ccctcagtgctcacaggtgacgggtgtgagcagaaactcttagtttacctcagcacagaa
gggccagaggaggtggaagactcttccagaagcttggcggtctctggtgacacgataccc
cctcagcctgacaggaccaccaccagctcctgtgaaggagctgccgagcaggctgctggg
gacagaggtcatgttggacccaaagctcaggatccttccccagccaaggaaaagatgagc
agcctccggaaagtggaccgaggacactatcggagccggagagaccggtcctccagtggg
gagcacgtgagggacagcagaccccggccggaggaccatcaccataagaagcggcgctgc
tacagccgagagaggcccaagcaggaacgccaccctgctaatacatactgcaatgggagc
cagcatctgggccacggtgacagagccagccctgagcgccgctccctgagcaggtacagc
caccaccactcacggattaggagtggcctggagcaggactggagccggtaccaccatttg
gaaaacgagcatgcttggatcagggagagagtctacccggacaagcttcggtgggacaag
tgcaggtattaccacgacaggtacacacccctgtacatggcccgggacgcccgcgaatgg
cggcctctgcatggtcgtgagcatgaacgccttgtccagtctggacggccacacaaagac
agctactggggccgcaagggttgggagctgcaatcccgggggaaggaacggccccacttc
aacagcccccgagaggcccctggccttgctgtgccccttgagaggcatctccaagagaag
gctgcaatgagtgtggacagcagccacagtctccctgagcgttttcacgaacacgaaagt
gtcaagtcgaggaaacggaggtatgagactctagaaaataatgatggccgtctagaaaag
aaagtccacaaaagcctggagaaggactcgctagaagaaccaagggtgaagaagcacaaa
aagtctaaaaagaaaaagaagtccaaagataaacaccgggatcgagaaagcaggcaccag
caagaatctgatttttcaggagcatactctgatgctgacctccatagacaccggaagaaa
aagaagaaaaagaaaaggcattcaaggaagtcggaggactttataaaagatgcggagatg
catttaccgaagctctccagctatgaggccgcgggccatttccggagaacagagggcacc
tttctgctggctgatggtctgcctatggaagacagtggctctttccgggagaaaacgaag
catttaaggatggaaagccggcctgacagatgccatctgtcggagtatggccagggtaac
taa
DBGET
integrated database retrieval system
