Mus pahari (shrew mouse): 110312797
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Entry
110312797 CDS
T05929
Symbol
Rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110312797 (Rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110312797 (Rabgef1)
Membrane trafficking [BR:
mpah04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
110312797 (Rabgef1)
Protein recycling
Other Rab GTPase associated proteins
110312797 (Rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
110312797
NCBI-ProteinID:
XP_021042341
Ensembl:
MGP_PahariEiJ_G0024386
LinkDB
All DBs
Position
23:complement(24557770..24600198)
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AA seq
491 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQRQIQEDWELAER
LQREEEEAFASSQSSQGAQPLTFSKFEEKKSNEKARKVTTVKKFFSASSRAGSKKEIQEA
KAPSPSINRQTSIETDRVTKEFIDFLKTFHKTGQEVYKQTKMFLEAMPYKRDLSIEEQSE
CTQDFYQNVAERMQTRGKVPPEKVEKIMDQIEKHIMTRLYKYVFCPETTDDEKKDLAIQK
RIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIFN
AIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLC
CAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQESESWPPEACLGVKQMYKNLDLLSQL
NERQERIMNEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIKPPNQPLAAIDSENVENDKL
PPPLQPQVYAG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaagtccgaacgcaggggaattcatgtggatcaatctgagctcctgtgcaag
aaaggatgcggttactatggcaaccctgcctggcagggtttctgctccaagtgctggagg
gaggagtaccacaaggcccggcagaggcagatccaagaggactgggaactggcagaacgg
cttcagcgagaggaagaagaggccttcgccagcagccagagcagccaaggagcccagccc
ctcaccttctccaagttcgaggagaagaagagcaatgagaaagcccgcaaagtcaccaca
gtgaagaagttcttcagcgcctcctccagggctgggtccaagaaggaaattcaggaagcg
aaagctcccagtccctccataaaccggcaaaccagcattgagacggaccgagtgactaag
gagttcatagactttctcaagaccttccacaagacaggccaagaagtctacaaacagacg
aagatgtttttggaagcaatgccttataaaagggatttaagcatcgaggaacagtcagag
tgtactcaggacttttaccagaatgtggccgaaagaatgcagacccgcgggaaagtgcct
ccagagaaagtggagaagataatggatcagatcgaaaagcacatcatgacccgtctctat
aaatatgtgttctgcccagagaccactgatgatgagaagaaagatctcgccattcaaaaa
cgaatcagggctctgcactgggtgacgcctcagatgctctgtgtccctgtcaatgaggaa
atccctgaagtgtccgacatggtggtgaaagctatcacagacatcattgagatggactca
aagcgtgtgcctcgggacaagctggcctgcatcaccaggtgcagcaagcacatcttcaat
gccatcaagatcaccaagaatgagccagcctctgccgatgacttcctgcccacccttatc
tacattgtcctgaagggcaacccccctcgtttgcagtccaatatccagtacatcactcgc
ttctgcaaccccagccggctcatgacgggcgaggatggttactatttcaccaacctgtgc
tgtgctgtggctttcattgagaaattagacgcccagtctttgaatctaagtcaggaggat
tttgaccggtacatgtctggccagacgtcccccaggaagcaagagtctgagagttggccc
ccggaggcctgcttaggtgtgaaacaaatgtataagaacttggacctcctgtctcagctg
aatgaacggcaggaaaggatcatgaacgaagccaagaaactggaaaaagacttaatagac
tggacagacgggattgccaaggaagttcaagacattgttgagaaatatccactggagatt
aagcccccgaaccaacccttagcagccatcgactctgagaatgtggagaacgataagctc
cctccccctctgcagcctcaggtgtacgcagggtga
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integrated database retrieval system