KEGG   Mus pahari (shrew mouse): 110312848
Entry
110312848         CDS       T05929                                 
Symbol
Rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03030  DNA replication
mpah03410  Base excision repair
mpah03420  Nucleotide excision repair
mpah03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110312848 (Rfc2)
   03410 Base excision repair
    110312848 (Rfc2)
   03420 Nucleotide excision repair
    110312848 (Rfc2)
   03430 Mismatch repair
    110312848 (Rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpah03032]
    110312848 (Rfc2)
   03036 Chromosome and associated proteins [BR:mpah03036]
    110312848 (Rfc2)
   03400 DNA repair and recombination proteins [BR:mpah03400]
    110312848 (Rfc2)
DNA replication proteins [BR:mpah03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110312848 (Rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    110312848 (Rfc2)
Chromosome and associated proteins [BR:mpah03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110312848 (Rfc2)
DNA repair and recombination proteins [BR:mpah03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110312848 (Rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    110312848 (Rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 AAA_16 Viral_helicase1 Mg_chelatase AAA_24 AAA_11 Rad17 AAA_assoc_2 RuvB_N nSTAND3 DNAX_ATPase_lid AAA_19 MipZ AAA_5 AAA_18 AAA_28 ABC_tran AAA_25 AAA_30 AAA_23 NTPase_1 MeaB RNA_helicase SLFN-g3_helicase DUF815 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 110312848
NCBI-ProteinID: XP_021042425
Ensembl: MGP_PahariEiJ_G0024370
LinkDB
Position
23:complement(20137739..20153846)
AA seq 349 aa
MEVQESGCGSAESGAQEPSPVPSKTAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAR
EGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQ
QKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRC
AVLRYTKLTDAQVLARLMNVIEKEKVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGY
INSENVFKVCDEPHPLLVKEMIQHCVDANIDEAYKILAHLWHLGYSPEDVIGNIFRVCKT
FPMAEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggaggttcaggagagcggctgtggctcagccgagagtggggcgcaggagccctcgccc
gtccccagcaagaccgccggccactacgagctgccgtgggttgagaaatacagaccggtg
aagctcaacgaaatagtgggcaatgaagacactgtgagcaggctggaggtctttgcaaga
gaaggcaatgtgcccaatatcatcattgctggtcccccaggaactggcaagacgaccagc
atcctctgcttggcgagagctttgctgggacccgccctgaaggacgcagtcctggaactc
aatgcctcaaatgacaggggcatcgatgtggtgaggaataaaatcaaaatgttcgctcag
cagaaagtcacccttcccaagggccggcacaagatcatcattcttgatgaagcagacagc
atgacggatggtgcccagcaggccctcaggaggaccatggaaatctactccaagacgacc
cgattcgctttggcttgtaatgcttcagacaaaatcatagagcccatccagtcccgctgt
gcggtgctccgctacaccaagctcactgacgctcaggtcctcgccaggctcatgaatgtc
atcgagaaggaaaaggtgccatacacagatgacggcctggaagccattatcttcacagcc
cagggagacatgcgccaggcactgaacaacctgcagtccaccttctcaggatttggctat
atcaacagtgagaatgtattcaaggtctgtgacgagccccaccccctgctggtgaaggag
atgatccagcactgcgtagacgccaacattgacgaggcctataagattctcgcacacctg
tggcacctgggctactcaccagaagatgtcatcggcaatattttccgagtctgcaaaacc
ttcccaatggcggaatacttgaaactggagttcatcaaggagattggatacactcacatg
aaagtggcggaaggagtgaactccctgctgcagatggctgggctcctggccaggctgtgt
cagaagaccatggctccagtggccagctga

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