Mus pahari (shrew mouse): 110312858
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Entry
110312858 CDS
T05929
Symbol
Vps33a
Name
(RefSeq) vacuolar protein sorting-associated protein 33A isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04140
Autophagy - animal
mpah04148
Efferocytosis
mpah05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110312858 (Vps33a)
04148 Efferocytosis
110312858 (Vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110312858 (Vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110312858 (Vps33a)
Membrane trafficking [BR:
mpah04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110312858 (Vps33a)
Hops complex
110312858 (Vps33a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
DTP-pb9_A-dom_C
Pectinesterase
Motif
Other DBs
NCBI-GeneID:
110312858
NCBI-ProteinID:
XP_021042440
Ensembl:
MGP_PahariEiJ_G0024310
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All DBs
Position
23:complement(13487533..13515491)
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AA seq
597 aa
AA seq
DB search
MAAHLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGSRLPAADVKNIIFLVRPRLELMDIIAENVLSEDRRGPTRDFHILFVPRRSLL
CEQRLKDLGVLGSFIHREEYSLDLIPFDGDLLSMESEGAFKECYLEGDQTSLYHAAKGLM
TLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSVFPVFDNLLLLDRNVDLLTPL
ASQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGGGGGKDLPTEAKKLQLNSAEELYAEI
RDKNFNAVGSVLSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARGSLANHTSIAE
LIKDVTTSEDFFDKLTVEQEFMSGIDTDKVNNYIEDCIAQKHPLIKVLRLVCLQSVCNSG
LKQKVLDYYRREILQTYGYEHILTLNNLEKAGLLKAQTGGRNNYPTIRKTLRLWMDDVNE
QNPTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEERQPLPTGLQKKRQP
GENRVTLVFFLGGVTFAEIAALRFLSQLEDGGTEYVIATTKLMNGNSWIEALMEKPF
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcacctgtcgtacggccgagtgaacctgaacgtgctgcgcgaggcggtgcgc
cgggagctgcgcgagttcctggacaagtgcgctgggagcaaggcaatagtgtgggatgag
tacttaactggaccatttggactgatcgcacagtactcgttactaaaggaacatgaagtg
gaaaaaatgttcacacttaagggaagtcgtttgccagcagctgatgtcaagaacatcatt
tttttggtcagacccaggctagagttgatggacataattgctgagaacgtactcagtgag
gacaggcgtggccctaccagggatttccatattttgtttgtgcctcgccggagcctactg
tgtgagcaacggctgaaggacctgggagttttgggatcctttattcatcgagaggagtac
agtttggatctcattccatttgatggggacctcttatccatggagtcagagggtgctttc
aaagagtgctacctggaaggcgaccagaccagcctgtaccacgcagccaaggggctgatg
accctgcaggcgctgtatggaactatcccccagatctttgggaagggagagtgtgctcgg
caagtggccaatatgatggtcaggatgaagcgggaattcacaggaagccagaactcagtg
ttccccgtgtttgataaccttttactgcttgatcgcaacgtggatctcctgacgccgctc
gcctcccagctcacgtacgaaggcctcatcgacgagatttacggcattcagaacagttat
gtgaagttgcctccagagaaatttgcacccaagaagcagggtggtggcggcgggaaggac
cttcccacggaggcgaagaagcttcagctcaactccgcagaggaactctatgctgagatc
cgagacaagaatttcaacgctgtgggctctgtgcttagcaagaaggcgaagatcatctct
gcagcgttcgaggagcgacacaacgctaagactgttggtgagatcaagcagttcgtgtcc
cagctaccccacatgcaggcagccaggggatcgctcgccaaccacacctcaattgcagag
ttgatcaaagacgtcaccacttctgaagacttctttgataagttgacagtggagcaggag
ttcatgtccgggatagacactgataaggtcaacaattacatcgaggactgtattgcccaa
aagcatcccctcatcaaggtgctgagactggtctgcctccagtccgtgtgcaacagtggg
ctcaagcagaaggttctggactactacagaagggaaatcctccagacctatggctatgag
cacatactgaccttgaacaacctggagaaggccggcctgctcaaggctcagacagggggc
agaaacaattacccaacaatcaggaaaacactgcgtctctggatggatgatgtcaatgaa
caaaaccccacagacatatcctacgtgtacagcggttacgctccactcagcgtgcgactg
gctcagctcctttcccggccaggctggcggagcatcgaggaggttctccgcattctccca
gggccccactttgaagaaaggcagccactgcccactgggctgcagaagaaacgccagcca
ggagaaaacagagtcacactggtatttttccttgggggcgtcacctttgcggaaatagct
gccctgcgctttctgtcccagctggaagacggaggcaccgagtatgtcattgccaccact
aaactgatgaatggaaacagctggatagaagctctcatggaaaagcctttctag
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