Mus pahari (shrew mouse): 110312901
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Entry
110312901 CDS
T05929
Symbol
Rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03030
DNA replication
mpah03410
Base excision repair
mpah03420
Nucleotide excision repair
mpah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110312901 (Rfc5)
03410 Base excision repair
110312901 (Rfc5)
03420 Nucleotide excision repair
110312901 (Rfc5)
03430 Mismatch repair
110312901 (Rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpah03032
]
110312901 (Rfc5)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110312901 (Rfc5)
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110312901 (Rfc5)
DNA replication proteins [BR:
mpah03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110312901 (Rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
110312901 (Rfc5)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
110312901 (Rfc5)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110312901 (Rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
110312901 (Rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_16
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_14
DEAD
DUF815
ResIII
AAA_5
AAA_19
ATPase_2
AAA_30
TIP49
PhoH
AAA_7
TniB
DNAX_ATPase_lid
nSTAND3
Mg_chelatase
Thioredoxin_6
bpMoxR
NPHP3_N
AAA_25
AAA_3
ABC_tran
AAA_28
Motif
Other DBs
NCBI-GeneID:
110312901
NCBI-ProteinID:
XP_021042507
Ensembl:
MGP_PahariEiJ_G0024225
LinkDB
All DBs
Position
23:complement(7196051..7205716)
Genome browser
AA seq
339 aa
AA seq
DB search
MAAAAPSQQRPAAARARNLPWVEKYRPQTLADLISHQDILSTIQKFISEDRLPHLLLYGP
PGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKL
VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPEL
MVPRLEHVVQEENVDISEDGMKALVTLSTGDMRRALNILQSTNMAFGKVTEETVYTCTGH
PLKTDIANILDWMLNQDFTTAYKNIMELKTLKGLALHDILTEVHLFVHRVDFPSSVRIHL
LTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgccttcgcagcagcggccggcggcggcccgggcccggaacctgccc
tgggtcgagaagtaccggccacagaccttggccgatctcatttctcaccaggacattctg
agtaccattcagaagttcatcagtgaagaccgcctgccacacctacttctctatggccct
ccagggacaggaaagacatccaccatcctggcctgtgccaagcaactgtacaaagataaa
gaattcggctccatggtcttggagctgaatgcttctgacgaccgagggatcgatatcgtt
cgggggccaatcctcagctttgctagcacaaggacaattttcaagaaagggtttaagctt
gtgatcctggacgaagccgacgccatgactcaagatgcccagaacgccttgagacgagtg
attgagaagttcacagaaaacaccaggttttgcctcatctgtaactacctgtccaagatc
atccctgccttgcagtcacggtgcacgaggttccgatttggccctctgacacccgagctc
atggttcctcgactggagcatgtggtacaagaagagaatgtggatataagtgaagatgga
atgaaggccctggtcactctgtccactggggacatgcgaagggctctgaacatcctgcag
agtaccaatatggcctttgggaaggtgacagaggagactgtctacacttgcaccggacac
ccactcaagacagacattgccaacatactggactggatgctcaatcaggacttcaccacc
gcctacaaaaatatcatggagctgaagactctgaagggcttggcgctgcatgacatcctg
accgaggttcacttgtttgtgcacagagttgactttccatcttcagttcggatacactta
ttgaccaagatggcagacattgagtacagactttccgttggcaccaatgagaagatacag
ctgagctccctcatcgccgcttttcaagtcaccagagacctgatagttgcagaggcctag
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integrated database retrieval system