Mus pahari (shrew mouse): 110312938
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Entry
110312938 CDS
T05929
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110312938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110312938
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110312938
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110312938
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
110312938
NCBI-ProteinID:
XP_021042564
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All DBs
Position
23:36132541..36136618
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AA seq
553 aa
AA seq
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MRTVRKGQDSMVRTDGHTLSEKRNYQTAQVTNSMFGASRKKFVEGVDSDYHDENMYYSQS
SVFSHRSEKDLLASPSPSGQLSQFGASLYGQQSALGLPVRRMSNNTPQLNRSLSQGTQLP
SHVTPTTGVPTMSLHMPPSPSRGILPMNLRSMMNHSQVGQGIGIPSRTNSMSSSELGSPN
RSSPSIIYMPKQQPSRQPFTVKSMSGFGMNRNQAFGMNNFLSSNIFNGTDGSENVTGLDL
SDFPALADGNRREGNSNPTPLINHLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSS
YKDPMSSNDDSKSNLSTSEKTTTSTDGPKFHGDKSSTTQNNNQQKKGIQVLPDGRVTNIP
QGMVMDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSSENPYPKFASPWASSP
CRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNSGDVLQLLAAVELFNR
DWRYHKEERVWITRTPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHL
PSTFNYNPAQQAF
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgtgaggaaaggacaggactctatggtgaggactgatggacatacattatct
gagaaaagaaactaccagactgcacaggtgacaaacagcatgtttggtgcttcaagaaag
aagtttgtagagggggtggacagtgactaccatgatgagaacatgtactacagccagtct
tctgtgttctcacatcggtcagagaaagatctgctggcatcgccatctccatcaggtcag
ctgtctcaatttggggcaagtttatatgggcaacaaagtgcactaggccttccagtgagg
cggatgagcaacaatacccctcagttaaatcgcagcttatcacaaggcacgcagttaccg
agccacgtcacgccaacaacaggggtaccaacaatgtcacttcacatgcctccatctcca
agcaggggtattttgcctatgaatcttaggagtatgatgaaccactcccaggttggtcag
ggcattggaattcctagcaggacaaatagcatgagcagttcagagttaggtagccccaac
agaagctcgccgagcataatatatatgccaaagcaacagccatctcgacagccttttact
gtgaagagtatgtctggatttggaatgaacaggaatcaggcatttggaatgaataacttc
ttatcaagtaacatttttaatggaacagatggcagtgaaaatgtgacaggattggacctt
tcagatttcccagcgttagcggacgggaatagaagggaagggaacagcaacccaactcct
ttaataaaccatttggctggaagagctccttatgttggaatggtaacaaaacctgcaaat
gagcaatcccaagacttctcaatacacaacgaagattttccagcattacctggttccagc
tataaagatccaatgtcaagtaatgacgacagcaaatctaatttaagtacatcagagaag
acgactacaagtacagatggacccaaattccatggagataaaagttcaacaacacaaaac
aataatcagcagaaaaagggaatccaggtgttacctgatggtcgagttactaacattcct
caagggatggtgatggaccaatttggaatgattggcctgttaacatttatcagggcagca
gagacagacccaggaatggtacatcttgctttaggaagtgacttaacaacattaggtctc
aatctgaactcatctgaaaatccctatcccaaatttgcatcaccctgggcttcttcacct
tgtcggcctcaagacatagacttccatgttccatcagaatatttaacaaacattcacatt
agggataagctggctgcaatcaaacttggccgatatggagaagacctcctcttctatctg
tattacatgaacagcggggatgtattacaactcttagctgcagtagagctttttaaccgt
gattggagataccacaaggaggagcgggtatggattaccaggacaccaggcatggagcca
acgatgaaaaccaacacgtatgagcgggggacctactacttctttgactgtctcaactgg
aggaaagtagctaaggagttccatctggaatatgacaaattagaagagcgacctcacctg
ccatccacattcaactacaaccctgctcagcaagccttctaa
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