Mus pahari (shrew mouse): 110312997
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Entry
110312997 CDS
T05929
Symbol
Tnrc18
Name
(RefSeq) trinucleotide repeat-containing gene 18 protein
Organism
mpah
Mus pahari (shrew mouse)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_TNRC18
BAHCC1-like_Tudor
BAH
Tudor_3
DUF4537
Motif
Other DBs
NCBI-GeneID:
110312997
NCBI-ProteinID:
XP_021042654
Ensembl:
MGP_PahariEiJ_G0024538
LinkDB
All DBs
Position
23:complement(32824870..32925085)
Genome browser
AA seq
2959 aa
AA seq
DB search
MDGRDFGPQRSVHGPPPPLLSGLAMDSHRVGAATAGRLPSSGLPGPPPPGKYMAGLNLHP
HPGEAFLGSFVSSGMGPSASSQGSPVSLPSDLSFSSPTPSNLPMVQLWAAHAHEGFSHLP
SGLYPSYLHLNHLDPPSSGSPLLSQLGQPSIFDTQKGKGAGRDGFYLPAPGTLHAHTPSS
RTPSGHSSGGPAKGSSREGTGKDRAGRGGDPPPMFGKKDPRAREEVSGPRGVVDLTQEAR
AEGRQDRGASRLAERLSPFLAEVKAKGALPPSALSLCNGVVDAGLVAELGRGGSKEVARQ
EENARLLRRAEALLPAARPCGSPLPPPPPPLPPKGPPAPPSSTPAGVYTVFREPGREHRV
VAPTFVPSVEAFDERVGPIQIASQARDVRAREREPGRPGVLQGPPGSPRLERPEVLREKS
SVIRSLKRPPPSDGPPAARSSRSSPDARAYLPPKELLKPEADPRPCERAPRGPSASAAQQ
TAKLFGLEPSRPPGPEHKWKPFELGNFATTQMAVLAAQHHHASRAEEEAAVATASKKAYL
DPGGAMPRASATCGRPGADLHPAAHGPGEASAMQSLIKYSGSFAREAVAVRPGGCGKKSP
FGGLGTMKPEPTPTSAGPPRAQARLAHPGVPTAGGGRQLKRDPERPESAKAFGREGSGAQ
GEAEVRHPPVGIAVAVARQKDSGSSSRLGPGLVDQERSLSLNNVKGHGRTDDECDRARHR
EDRLLGTRLDRDQEKLLRESKELADLARLHPTSCAPNGLNPNLMVTGGPTLAGSGRWSAD
PTAHLATNPWLPRSGSTSMWLAGHPYGLGPPSLHQGMAPAFPPGLGGSLPSAYQFVRDPQ
SGQLVVIPSDHLPHFAELMERAAVPPLWPALYPPGRSPLHHAQQLQLFSQQHFLRQQELL
YLQQQAAQALELQRSAQLVQERLKAQEHRTEMEEKISKRSPETTGKAGLSAAGPGLLPRK
SAGLTNGPAGSHSKAVSPPPSPRASPVTSLKAKVIQKVEDVSKPPAYTYPATPSSHPSSP
PPASPPPTPGLTRKEEAPENVVEKKDLELEKETPSPFQALFTDIPPRYPFQALPPHYGRP
YPFLLQPAAASDADGLAPDVPLPADGPERLALSPEDKPICLTPSKIPEPPRDSPEEEQLA
DREVKAEVEDIEEGPTELPPLESPLALPVPENMVAASPAGGRVGSPLEAQALSTAGPGCR
EPSEASDFAQVAEPQVELPSRTEPHVAALELGTQLTPEPLVETKEEPVEVPLDVPMEEPT
AEAEPGDSLPQPSLTEPQPGLELSDCNLPVPEDQCLNLEAQEAVPAPASTCYLEETHSES
LLPGLDDPLAGMNALVAAAELPQARPLPSLGPGVPAGEKLDTAPSLALEHSFLQGITLLS
EIAELELDRRGQEAADPEPNLVVRPSLESLLAASSHMLKEVLESPFSDPLKNLRLPRELN
SNKKYSWMQKKEERMFAMKSSLEDMDALELDFRMRLAEVQRRYKEKQRELVKLQRRRDSG
DRHEDAHRSLARRGPGRPRKRTHTPSALSPPCKRGKSHSSSGKLSSKSLLTSDDYDLGAG
IRKRHKGPEEEQEALMAMGKARSRNQSWDDHDSSDFMSQLKIKKKKMASDQEQLASKLDR
ALSLTKQDKLKSPFKFSDGPGGKPKTGGGCGRFLTQYDSLLGKNRKTLAKGLGLSLKPSR
EGKHKRASKARKMEGGFQARGQPKSVHSPFASEVSSQSYNTDSDEDEDFLKNEWSAQGPS
SSKLTSSLLCGMVPKNSKPATGPKLTKRGLAGPRTLKPKVVTSRKQSFCLLLREAEARSS
FSDSSEEDSFDQDDSSEEEEEELEEEEEDEEEEGVGSYRLGAGEQALSPSLEESGLGLLA
RFAASALPSPVVGPPLSVVQLEAEQKARKKEERQSLLGTEFEYTDSESEAKIPKQSTAGL
LRTKKGVGEPGQSLATPGPGTRASGPTSPDKAKLVSEKGRKARKIRGPKEPGFEAGPEAS
DDDLWTRRRSERIFLHDASAAVQAPSNTAPATKPSRCGRGGAPSPRKDTGRAKDRKDPRK
KKKGKEAGSAATLPPPRVATLPDSRAPHPGALATAKRSKAKARGKEAKKENRGKGGAVSK
LMECMAAEEDFEANQDSSFSEDEHLPRGGATERPLTPAPRSCIIDKEELRDGLRVLIPLD
DKLLYAGHVQTVHSPDIYRVVVEGERGNRPHIYCLEQLLQEAIIDVRPASTRFLPQGTRI
AAYWSQQYRCLYPGTVVRGLLDLDDDGDLITVEFDDGDTGRIPLSHIRLLPPDYKIQCAE
PSPALLVPSAKRRSRKTSKDTGEVKEGAATGPQEAAGGKARGRGRKPSTKAKADRAIVLE
EGASTNEVPSAPLALEPVSTPNSKKSTSEPVDKRARAPKARSVSAQPSPVPPTFSSCPAP
EPFGELPTPTTAPLVTMPVTMPATRPKPKKARAAEGSGAKGPRRPGEDDELLVKLDHEGV
MSPKSKKAKEALLLREDPGPGGWPESTGLLSLGSYSPAVGSSDPKATWPKGLDGDLTQEP
GPGLPLEDPGNSKSPDKAQAEQDGAEELETTSTSSSSSSSSSSSSSSSSSSSSSSSGSET
EGEEDAEKNREDGRGAGGRTCSAASSRASSPASSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPAAGPSTQPALPTKVPKPPSKARSS
AHSPGKKAPPTTQPPPQPPPQPQQTLQPKTQAGAGAKSRPKKREGVHLPTTKELAKRQRL
PSVENRPKIAAFLPARQLWKWFGKPTQRRGMKGKARKLFYKAIVRGKEMIRIGDCAVFLS
AGRPNLPYIGRIQSMWESWGNNMVVRVKWFYHPEETSPGKQFHEGQHWDQKSGHSLPAAL
RASSQRKDFMERALYQSSHVDENDVQTVSHKCLVVGLEQYEQMLKTKKYQDSEGLYYLAG
TYEPTTGMIFSTDGVPVLC
NT seq
8880 nt
NT seq
+upstream
nt +downstream
nt
atggatggccgagatttcgggccccagcggtccgtccacggccccccgccgccgctgctg
tctggcttggccatggacagccaccgcgtgggcgcggccaccgccggacgcttgccctcc
tcgggcttgccaggtcccccgccgcccgggaaatacatggccggtctcaaccttcacccg
cacccgggcgaggccttcttgggcagctttgtgtccagcgggatggggccctcggcctcg
tctcaggggagcccggtatccttgccctctgacctctccttcagctcccccacccccagc
aacctgcccatggtgcagctgtgggctgcccacgcccatgaaggcttctcccacctgccc
agtgggctgtatccatcctacctccacctgaaccacctggacccccccagcagtgggagc
cccctcctcagccagctgggccagcccagcatcttcgatacccagaaaggtaagggggca
ggaagggatggcttctacctgcccgcaccggggaccctgcatgctcacacgccctcgtcc
agaactcccagtggccactcctcaggcggtccagccaaaggctcctcccgggaaggtaca
gggaaggatcgcgcaggccgtggcggagaccctcctccgatgtttggcaagaaagaccct
cgggcacgtgaggaggtgtccggcccccgaggtgtggtggacttgacccaggaggcccga
gcggagggccgccaggaccgaggagcctcacgcctggctgagcgcctgtcgcccttcctg
gcagaggtcaaagccaagggtgcactgccgccgtcggccctgagcctgtgcaatggcgtg
gtggacgcggggctggtggccgagttgggccgtggaggttccaaggaggtggcgaggcag
gaggagaacgctcggctgctgcggcgggctgaggccctgctgcccgctgcaaggccctgt
gggtccccactaccgccgccaccaccgccactgccccccaagggtccccctgcaccccct
tcctctacgccagccggtgtctacaccgtgttccgtgaaccaggccgtgagcaccgcgtg
gtggcacccacctttgtgccttctgtggaggcctttgatgagcgggtgggacccatccag
atagcatcccaggctcgcgatgtccgggccagggagcgcgagccgggccgtcctggggtc
ctgcaaggtccacccggatctccacgcctggagcggccagaggtcctgcgggagaaaagc
tcggtcatccgttccctcaagcgtccgcctccgtccgatggacccccagcagcccgctcc
tcccgctcctccccggatgcgcgagcttacctgccccccaaggaactactcaagcccgag
gctgatccgaggccttgcgagcgcgcaccccgaggcccgagcgcttctgctgcccagcag
actgctaagctctttggcctggaaccatcccggccccccgggccggagcataagtggaaa
ccctttgaactgggcaactttgccaccacgcagatggctgtcctggcggcccagcaccac
catgccagcagagccgaagaggaagcagctgtcgccacggcatccaaaaaggcctacctg
gaccccgggggcgcaatgccccgtgcctcggccacctgcggcaggccgggtgctgacctc
cacccggcagcccacggaccgggagaggcctctgctatgcagagcctcatcaaatacagc
ggtagctttgctcgggaggcggtggccgtgcgtcccggtggctgtgggaagaagagccct
tttggaggcctgggcaccatgaaacctgaacccacgcccacgtctgcgggtccccctaga
gcccaggcccgactcgcacaccccggggtccctacagccggagggggccggcagctgaaa
cgggacccagagagacctgagagcgccaaggcctttgggcgagagggctctggtgcccag
ggggaagctgaagtacgacacccgcctgttggcattgctgtggctgtggccaggcagaag
gacagtgggagcagtagccggctggggcctgggctggtagaccaggaacgctctttgtca
ctgaacaatgtcaaagggcatggccggactgatgatgagtgtgatcgagccaggcaccgg
gaggatcggctgctagggacacggctggaccgggaccaggagaagttgctccgggaaagt
aaggaactggctgatttggcccgtctacaccccaccagctgcgctcccaatggtctgaac
cccaacctcatggtgactggtggcccaacgctggcaggctcaggacgctggtctgctgat
cccacggctcacttggccacgaacccctggctgcctcgctccggtagtacatccatgtgg
cttgccggacacccttatggcctgggacccccctctttgcaccagggcatggcccctgca
tttccacctggcttagggggctccttgccgtcagcttaccagttcgtcagggacccccag
tctggccagctggtggttatccctagtgatcacctgcctcattttgccgagctgatggag
cgcgcggcggtgcctcccctctggcctgccctgtacccgccgggccgcagccccctgcac
cacgctcagcagctgcagctcttctctcagcagcactttttgcggcagcaagagctgctc
tacctgcaacagcaggcggcccaggccctggagctgcagcggagcgcacagctggtgcag
gagcgcttgaaagcacaagagcatcggacggagatggaggagaagattagcaagaggagc
ccggagaccacgggcaaggccggcctgagtgccgcaggccctgggctcctgcctcgcaag
tctgccggcctgaccaacggcccggcaggcagccacagcaaggccgtgagcccacccccg
tctccccgagcctcccccgtgacctctctgaaggccaaggtcatccagaaggtggaggat
gtgtctaagcctccagcctatacctaccccgccacacctagctcgcaccccagcagcccg
ccacctgcctccccacctcctacccctgggctcacccgaaaggaagaggctcctgagaac
gtggtggagaagaaagacctggagctggagaaggagacgcccagtccgttccaggccctg
ttcacagatatccctcccaggtatccattccaagccctgccaccgcactacgggcgaccc
taccccttcctgctgcaacccgctgccgcctctgatgccgatggccttgccccggacgtg
ccactcccggcggatgggcccgagcgcctggcactgtctcctgaggataagcccatctgc
ctgacaccctccaagatcccagagccacctcgggacagcccggaggaggagcagctggcc
gaccgggaggtgaaggccgaggttgaggatatcgaagagggccccacagagctgcctccc
cttgagtcaccattggccctgcccgtcccagagaacatggtggctgcgagccctgcaggt
ggccgcgtaggtagtcctctcgaggcccaggcattgagcacagcaggtccgggctgccgg
gaaccctctgaagcatcagactttgcacaggttgctgaaccgcaggtggagctaccgagc
aggacagagccccacgtggctgccctggagctgggcacacagctgacacccgagccactg
gtagagactaaggaagagccagtggaggtgcccctggatgtgccgatggaggagcccacg
gcagaggcagagcctggggacagtctgccccagccatccttgactgagcctcagcccggc
cttgagctctcagactgtaatttgcctgtcccagaggaccaatgtctcaacctggaggcc
caggaggctgtgcctgctcctgccagtacctgctatctggaagagacccactctgaatcc
ctcctgcctggcctggatgacccactggcaggcatgaatgcactggtggctgcagccgag
ctgccccaggccaggcctctgccctccctgggtcctggagtcccagccggggagaagctg
gacacagcccccagcctagccctggaacacagcttcctgcagggcatcaccctcctgagt
gagatagctgagctggagctggaccggaggggccaggaggctgcagacccagagccaaac
ctggtggtgcgaccctccctggaaagcctgctggccgccagcagccacatgctgaaggag
gtgctggagagccccttctcagacccactcaagaacttgcggcttccgcgtgaactgaac
tccaacaagaagtatagctggatgcagaagaaggaggagcggatgtttgctatgaaatct
tccttggaggacatggatgcgctggagctggacttccggatgcgactggcagaggtccag
cgacggtacaaagagaaacagcgggagttggtcaagctccagagacgccgggactccggg
gacaggcacgaggatgcccatagaagcctggcacgcagaggccctggcaggccgaggaaa
cggacccacaccccgagcgccctgtcgcccccctgcaagagagggaagagccacagcagt
agcggaaagctgagcagcaagtccttgctgacctcggacgactatgatctgggagcaggg
ataagaaagagacacaaggggcctgaggaggagcaagaggccctcatggccatggggaaa
gcccgcagcaggaaccagagctgggacgatcacgactcttctgattttatgagtcagcta
aagattaagaaaaaaaagatggcgagcgaccaggagcagttggcaagcaagctggacaga
gccctctccctcactaagcaagacaaactgaagtcaccgttcaagttttccgacggcccc
ggggggaaaccgaaaaccggtgggggctgtggcaggttcttgacacagtatgacagcctg
ctgggcaagaacaggaaaacgctggccaaaggactcggcttgtctctgaaaccctccaga
gaaggtaaacacaaaagagcttccaaagccaggaagatggaggggggcttccaggccaga
ggccagcccaagtctgtccattctccatttgcctcggaagtaagcagtcagtcttacaat
acggactctgacgaagacgaagacttcctgaagaatgagtggtctgcccagggcccctcc
agctccaaactgacctcgtccctcctgtgtggcatggtgcccaagaacagcaagccagcc
acaggccctaagcttaccaagaggggcctggcaggcccccggactttgaaacccaaggtg
gtcaccagcaggaagcagtccttctgtttgctgctccgagaggctgaggcccgctcctcc
ttcagcgactcttccgaggaggactcctttgaccaagatgacagctcagaagaggaggag
gaagagctagaggaggaggaggaagacgaggaagaggaaggcgttggtagctataggctg
ggtgctggggaacaggccctgtcgccaagcctggaggagagtggactggggctgctggcc
cgctttgcggccagtgctctccccagccctgtcgtggggccgcccctgtctgtggtgcag
ctggaagctgagcagaaggcccggaagaaggaagagcggcagagcttgctaggcacagag
ttcgagtacacagactcagagagtgaagcgaagattcccaagcagtcaactgctgggctg
ctgcggaccaagaaaggggttggggagccaggccagtctctggctacacctggacccggc
acccgggcctctggtcccaccagcccagacaaggccaagctggtctcagagaagggacgc
aaagcccggaagattcgtggccccaaggaacccggctttgaggctgggccagaggccagt
gacgatgacctgtggacgcgacgcaggagtgagcgcatcttcttacacgacgcctccgct
gcggtccaggcacccagcaacacggcgccagcaaccaagcctagccgctgtggcaggggt
ggtgccccaagcccacggaaggacaccgggcgagccaaggacaggaaggaccccaggaag
aagaagaaagggaaggaggctgggtcagcagccacactgccaccgccccgtgttgccacc
ctgcctgactccagggcaccccacccaggggctctggcgactgccaaacgcagcaaggcc
aaggccagagggaaggaagcaaagaaggagaaccgaggaaaagggggtgctgtgagtaag
ctgatggagtgcatggcggcagaggaagacttcgaagccaaccaggactcaagcttctct
gaggatgagcacttgccccggggcggggccacagagagacctctgaccccagcgccccgc
tcctgcatcattgacaaggaggagctgagggatggcctgcgagtgctcatccctctggac
gacaagctgctgtacgcggggcacgtgcagaccgtacattcgcccgacatataccgtgtg
gtggttgaaggtgagcgtgggaaccgtccccacatctactgcctggagcagctactgcag
gaggcgattatagatgtgaggccggcctctacacgcttcttgccccaggggaccaggatc
gccgcctactggagccaacaataccgctgtctgtatccaggcacggtggtccgagggctg
ctggacctggacgacgatggagacctgatcaccgtggagtttgatgacggagacacgggc
aggattcccctctcacacatccgcctcttgccgcctgactataaaatacaatgtgctgag
ccctccccagcactcctagtgcccagtgcgaaacgccgtagcaggaagaccagcaaagac
acaggggaagtcaaagaaggggctgccacggggcctcaggaggctgcagggggcaaggct
cgagggcgaggacggaagcctagcaccaaggccaaggctgacagagctattgtcctggag
gaaggggcatccaccaatgaggtccccagtgctcccttggccctggagcccgtcagcact
ccaaattctaagaagagtacctcagaaccagtggacaagcgggcccgagcccccaaagca
cgctcagtctctgcacagcccagccccgtaccacccaccttctctagctgcccagctcct
gagccctttggggagcttccaacccccactacagccccactcgtcaccatgcctgtcacc
atgcctgccactcgccccaaacccaagaaggctcgggccgctgaggggtctggtgccaaa
ggtccccggaggccaggggaagatgacgaactgcttgtcaaactggaccatgagggggtc
atgtctcccaaaagcaagaaggccaaagaggccctcctcctgcgggaagatccagggcct
gggggttggccagagtccacagggttgctcagcctgggcagctactcaccagctgttggc
agcagtgaccccaaggccacctggcccaagggtctagatggagacctcactcaggagccc
ggaccaggacttcctttagaagatcctggcaactccaaaagcccagacaaggcccaggct
gaacaagatggggcagaggagttggagaccacttccaccagcagcagcagcagcagcagc
agtagcagcagcagcagtagcagcagcagcagcagcagtagcagcagcggttcggagacc
gaaggcgaggaggatgctgagaagaacagggaggacggccggggtgcagggggccggacc
tgcagtgctgcgagttccagggcctcttctcctgcctcctcctcttcttcctcctcctct
tcctcctcttcttcttcctcctcttcttcctcctcctcttcttcctcttcctcctcctcc
tcttcctcatcttcttcttcctcttcctcctcctcttcctcctcttcctcttccaccaca
gacgaggactcttcttgcagctcagatgacgaagcagcccctgcccccgccgccggtccc
tctacccagccagcgctccccacgaaggtacccaagccacctagtaaggcgcgctcctcg
gcccactccccaggcaagaaggcaccccccaccacccagccaccgccccagcccccaccc
cagccccagcagactcttcagcccaagacccaggctggggctggggccaagagccgaccc
aagaagagagaaggcgtacacctgcctaccaccaaggagctggccaagcggcagcggctg
ccgtctgtggagaacaggcctaagatcgccgccttcctacctgcccggcagctttggaag
tggtttggcaagcccacccagcggcgaggcatgaaaggcaaagcccgcaagctcttctac
aaggccatcgtccgaggcaaggagatgatccgaatcggcgactgtgcagtcttcctgtca
gccggccgccccaacctgccctatattggccggatccagagcatgtgggagtcctggggc
aacaatatggtggttcgtgtcaagtggttctaccatccagaggagaccagcccgggcaag
cagttccatgagggccagcactgggaccagaagtcggggcatagcctccctgcagccctg
cgggcctccagccagagaaaggacttcatggagcgtgccctgtaccagtcctcccatgtg
gatgagaacgatgttcagacagtgtcccacaagtgcctggtggtgggcctggagcagtac
gaacagatgctgaagaccaagaaataccaggacagcgagggcctctactacctcgcgggc
acctatgagcccaccacaggcatgatcttctccacagacggcgtgcctgtgctctgctga
DBGET
integrated database retrieval system
